Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AC004870.1-201ENST00000315132 882 ntBASIC20.04■□□□□ 0.8
CASD1Q96PB1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASD1Q96PB1 TSPY19P-201ENST00000418461 509 ntBASIC20.04■□□□□ 0.8
CASD1Q96PB1 TSPY18P-201ENST00000441642 509 ntBASIC20.04■□□□□ 0.8
CASD1Q96PB1 FDX1P1-201ENST00000449115 551 ntBASIC20.04■□□□□ 0.8
CASD1Q96PB1 AP003733.1-201ENST00000491725 852 ntBASIC20.04■□□□□ 0.8
CASD1Q96PB1 AP000867.3-201ENST00000524675 377 ntBASIC20.04■□□□□ 0.8
CASD1Q96PB1 MIR3180-4-201ENST00000582223 153 ntBASIC20.04■□□□□ 0.8
CASD1Q96PB1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CASD1Q96PB1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CASD1Q96PB1 AC068587.9-201ENST00000641814 219 ntBASIC20.04■□□□□ 0.8
CASD1Q96PB1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASD1Q96PB1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.04■□□□□ 0.8
CASD1Q96PB1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASD1Q96PB1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.04■□□□□ 0.8
CASD1Q96PB1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.04■□□□□ 0.8
CASD1Q96PB1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CASD1Q96PB1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.04■□□□□ 0.8
CASD1Q96PB1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASD1Q96PB1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASD1Q96PB1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASD1Q96PB1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASD1Q96PB1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASD1Q96PB1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 TOB2P1-201ENST00000469761 992 ntBASIC20.03■□□□□ 0.8
CASD1Q96PB1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CASD1Q96PB1 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 AL390719.2-201ENST00000606993 987 ntBASIC20.03■□□□□ 0.8
CASD1Q96PB1 AL732292.2-201ENST00000609649 430 ntBASIC20.03■□□□□ 0.8
CASD1Q96PB1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASD1Q96PB1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CASD1Q96PB1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.03■□□□□ 0.8
CASD1Q96PB1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASD1Q96PB1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CASD1Q96PB1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASD1Q96PB1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CASD1Q96PB1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CASD1Q96PB1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASD1Q96PB1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASD1Q96PB1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 IFNL4P1-201ENST00000607083 540 ntBASIC20.02■□□□□ 0.8
CASD1Q96PB1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.02■□□□□ 0.8
CASD1Q96PB1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CASD1Q96PB1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CASD1Q96PB1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CASD1Q96PB1 AL158211.5-201ENST00000623583 2518 ntBASIC20.02■□□□□ 0.79
CASD1Q96PB1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CASD1Q96PB1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.02■□□□□ 0.79
CASD1Q96PB1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CASD1Q96PB1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CASD1Q96PB1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CASD1Q96PB1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CASD1Q96PB1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.01■□□□□ 0.79
CASD1Q96PB1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
CASD1Q96PB1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.01■□□□□ 0.79
CASD1Q96PB1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 FAAHP1-202ENST00000446499 1238 ntBASIC20.01■□□□□ 0.79
CASD1Q96PB1 KRT17P6-201ENST00000453795 1220 ntBASIC20.01■□□□□ 0.79
CASD1Q96PB1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CASD1Q96PB1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CASD1Q96PB1 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms