Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 AC008622.2-201ENST00000617006 1229 ntBASIC16.86■□□□□ 0.29
CPNE4Q96A23 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE4Q96A23 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE4Q96A23 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE4Q96A23 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CPNE4Q96A23 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE4Q96A23 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CPNE4Q96A23 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CPNE4Q96A23 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.85■□□□□ 0.29
CPNE4Q96A23 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.85■□□□□ 0.29
CPNE4Q96A23 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.85■□□□□ 0.29
CPNE4Q96A23 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CPNE4Q96A23 TERF1P1-201ENST00000311003 1181 ntBASIC16.85■□□□□ 0.29
CPNE4Q96A23 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CPNE4Q96A23 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CPNE4Q96A23 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CPNE4Q96A23 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CPNE4Q96A23 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE4Q96A23 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CPNE4Q96A23 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE4Q96A23 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE4Q96A23 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE4Q96A23 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE4Q96A23 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE4Q96A23 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE4Q96A23 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE4Q96A23 AC005521.1-201ENST00000393351 872 ntBASIC16.84■□□□□ 0.29
CPNE4Q96A23 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE4Q96A23 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE4Q96A23 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE4Q96A23 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE4Q96A23 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE4Q96A23 GPAT2P1-201ENST00000444924 1672 ntBASIC16.84■□□□□ 0.29
CPNE4Q96A23 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE4Q96A23 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE4Q96A23 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE4Q96A23 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.84■□□□□ 0.29
CPNE4Q96A23 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.84■□□□□ 0.29
CPNE4Q96A23 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CPNE4Q96A23 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CPNE4Q96A23 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CPNE4Q96A23 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CPNE4Q96A23 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.83■□□□□ 0.29
CPNE4Q96A23 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CPNE4Q96A23 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CPNE4Q96A23 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE4Q96A23 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE4Q96A23 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE4Q96A23 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE4Q96A23 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE4Q96A23 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE4Q96A23 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE4Q96A23 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 AL023284.2-201ENST00000405850 579 ntBASIC16.83■□□□□ 0.28
CPNE4Q96A23 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE4Q96A23 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.83■□□□□ 0.28
CPNE4Q96A23 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 KRT8P32-201ENST00000512863 1461 ntBASIC16.83■□□□□ 0.28
CPNE4Q96A23 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE4Q96A23 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 AC087289.5-201ENST00000586076 3175 ntBASIC16.83■□□□□ 0.28
CPNE4Q96A23 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CPNE4Q96A23 AC092865.7-201ENST00000641832 219 ntBASIC16.83■□□□□ 0.28
CPNE4Q96A23 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CPNE4Q96A23 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CPNE4Q96A23 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CPNE4Q96A23 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms