Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 AC004967.1-201ENST00000453589 447 ntBASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.65□□□□□ -0.38
ALMS1Q8TCU4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
ALMS1Q8TCU4 KRT8P7-201ENST00000533003 1432 ntBASIC12.65□□□□□ -0.39
ALMS1Q8TCU4 AL512353.2-201ENST00000448759 1962 ntBASIC12.65□□□□□ -0.39
ALMS1Q8TCU4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
ALMS1Q8TCU4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.65□□□□□ -0.39
ALMS1Q8TCU4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 AL691432.2-201ENST00000607222 2038 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 YBX2P1-201ENST00000394192 760 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 UPF3AP3-201ENST00000420996 769 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 AC132008.2-207ENST00000454517 770 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 SCARNA2-201ENST00000458748 420 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 AP003733.1-201ENST00000491725 852 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 AL356488.2-201ENST00000602755 427 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 FAM197Y3-203ENST00000618346 717 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 ZNF259P1-201ENST00000407656 1365 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 TREX1-205ENST00000625293 1783 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 DNAJB3-202ENST00000449667 1266 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 AL512408.1-201ENST00000569378 2000 ntBASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
ALMS1Q8TCU4 AC008556.1-201ENST00000610908 2040 ntBASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 AC093909.1-201ENST00000504731 1122 ntBASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 METTL21AP1-201ENST00000438852 635 ntBASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 AC145285.3-201ENST00000564603 959 ntBASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 GOLGA2P11-201ENST00000562660 1621 ntBASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ALMS1Q8TCU4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms