Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTL9Q8NET4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RTL9Q8NET4 AC016734.2-201ENST00000624325 1377 ntBASIC23.13■■□□□ 1.29
RTL9Q8NET4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.13■■□□□ 1.29
RTL9Q8NET4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTL9Q8NET4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RTL9Q8NET4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.13■■□□□ 1.29
RTL9Q8NET4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RTL9Q8NET4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTL9Q8NET4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC23.13■■□□□ 1.29
RTL9Q8NET4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.13■■□□□ 1.29
RTL9Q8NET4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.13■■□□□ 1.29
RTL9Q8NET4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTL9Q8NET4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
RTL9Q8NET4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.12■■□□□ 1.29
RTL9Q8NET4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTL9Q8NET4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTL9Q8NET4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
RTL9Q8NET4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.12■■□□□ 1.29
RTL9Q8NET4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTL9Q8NET4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RTL9Q8NET4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTL9Q8NET4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTL9Q8NET4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.12■■□□□ 1.29
RTL9Q8NET4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTL9Q8NET4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.12■■□□□ 1.29
RTL9Q8NET4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.12■■□□□ 1.29
RTL9Q8NET4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.12■■□□□ 1.29
RTL9Q8NET4 MIR3180-1-201ENST00000580374 94 ntBASIC23.12■■□□□ 1.29
RTL9Q8NET4 MIR3180-3-201ENST00000584616 94 ntBASIC23.12■■□□□ 1.29
RTL9Q8NET4 AL121672.3-201ENST00000608644 468 ntBASIC23.12■■□□□ 1.29
RTL9Q8NET4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTL9Q8NET4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTL9Q8NET4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC23.12■■□□□ 1.29
RTL9Q8NET4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RTL9Q8NET4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.11■■□□□ 1.29
RTL9Q8NET4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
RTL9Q8NET4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTL9Q8NET4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTL9Q8NET4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.11■■□□□ 1.29
RTL9Q8NET4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
RTL9Q8NET4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.11■■□□□ 1.29
RTL9Q8NET4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTL9Q8NET4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.11■■□□□ 1.29
RTL9Q8NET4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RTL9Q8NET4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
RTL9Q8NET4 PVRIG2P-201ENST00000435460 978 ntBASIC23.11■■□□□ 1.29
RTL9Q8NET4 TSSC2-201ENST00000450217 709 ntBASIC23.11■■□□□ 1.29
RTL9Q8NET4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC23.11■■□□□ 1.29
RTL9Q8NET4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTL9Q8NET4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
RTL9Q8NET4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.11■■□□□ 1.29
RTL9Q8NET4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
RTL9Q8NET4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
RTL9Q8NET4 AC006333.2-201ENST00000607957 2099 ntBASIC23.1■■□□□ 1.29
RTL9Q8NET4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RTL9Q8NET4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTL9Q8NET4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RTL9Q8NET4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.1■■□□□ 1.29
RTL9Q8NET4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTL9Q8NET4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTL9Q8NET4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
RTL9Q8NET4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.1■■□□□ 1.29
RTL9Q8NET4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTL9Q8NET4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTL9Q8NET4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.1■■□□□ 1.29
RTL9Q8NET4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTL9Q8NET4 AP002383.4-201ENST00000442518 975 ntBASIC23.1■■□□□ 1.29
RTL9Q8NET4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.1■■□□□ 1.29
RTL9Q8NET4 KRT8P26-201ENST00000534154 1276 ntBASIC23.1■■□□□ 1.29
RTL9Q8NET4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.1■■□□□ 1.29
RTL9Q8NET4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RTL9Q8NET4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RTL9Q8NET4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.1■■□□□ 1.29
RTL9Q8NET4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RTL9Q8NET4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.1■■□□□ 1.29
RTL9Q8NET4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.1■■□□□ 1.29
RTL9Q8NET4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RTL9Q8NET4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.1■■□□□ 1.29
RTL9Q8NET4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
RTL9Q8NET4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTL9Q8NET4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
RTL9Q8NET4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RTL9Q8NET4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTL9Q8NET4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTL9Q8NET4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTL9Q8NET4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RTL9Q8NET4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTL9Q8NET4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
RTL9Q8NET4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.09■■□□□ 1.29
RTL9Q8NET4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
RTL9Q8NET4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTL9Q8NET4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTL9Q8NET4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTL9Q8NET4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTL9Q8NET4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RTL9Q8NET4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.09■■□□□ 1.29
RTL9Q8NET4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
RTL9Q8NET4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC23.08■■□□□ 1.29
RTL9Q8NET4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms