Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 AL138966.2-201ENST00000621997 464 ntBASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH20Q8N6Y1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 FP475955.4-201ENST00000623131 1990 ntBASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 BX664615.1-201ENST00000443558 458 ntBASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 AC008622.2-201ENST00000617006 1229 ntBASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDH20Q8N6Y1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PCDH20Q8N6Y1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 MIR4674-201ENST00000582457 87 ntBASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 AC141257.4-201ENST00000634557 245 ntBASIC19.15■□□□□ 0.66
PCDH20Q8N6Y1 AC136944.6-201ENST00000634818 245 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms