Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ARHGEF28Q8N1W1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ARHGEF28Q8N1W1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ARHGEF28Q8N1W1 TPM4P1-201ENST00000436100 807 ntBASIC26.03■■□□□ 1.76
ARHGEF28Q8N1W1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC26.03■■□□□ 1.76
ARHGEF28Q8N1W1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC26.03■■□□□ 1.76
ARHGEF28Q8N1W1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC26.03■■□□□ 1.76
ARHGEF28Q8N1W1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
ARHGEF28Q8N1W1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC26.03■■□□□ 1.76
ARHGEF28Q8N1W1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 MIR3180-4-201ENST00000582223 153 ntBASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 AL592071.1-201ENST00000611956 408 ntBASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC26.02■■□□□ 1.76
ARHGEF28Q8N1W1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC26.01■■□□□ 1.76
ARHGEF28Q8N1W1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
ARHGEF28Q8N1W1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ARHGEF28Q8N1W1 LINC00167-201ENST00000530583 1419 ntBASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 KRT89P-201ENST00000620027 1478 ntBASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
ARHGEF28Q8N1W1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 KRT8P10-201ENST00000450021 1447 ntBASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 LINC00265-3P-201ENST00000447588 903 ntBASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 AC079781.3-201ENST00000449110 356 ntBASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 UNC93B7-201ENST00000509439 705 ntBASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 AL031008.1-201ENST00000619963 541 ntBASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 AL691432.3-201ENST00000621860 400 ntBASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 AFG3L1P-217ENST00000557444 2447 ntBASIC25.99■■□□□ 1.75
ARHGEF28Q8N1W1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ARHGEF28Q8N1W1 AL032819.2-201ENST00000624543 2162 ntBASIC25.98■■□□□ 1.75
ARHGEF28Q8N1W1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC25.98■■□□□ 1.75
ARHGEF28Q8N1W1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ARHGEF28Q8N1W1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
ARHGEF28Q8N1W1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms