Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC27.82■■■□□ 2.04
ABCA6Q8N139 AL353692.3-201ENST00000407031 1396 ntBASIC27.82■■■□□ 2.04
ABCA6Q8N139 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
ABCA6Q8N139 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
ABCA6Q8N139 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC27.82■■■□□ 2.04
ABCA6Q8N139 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC27.82■■■□□ 2.04
ABCA6Q8N139 TP73-202ENST00000354437 2140 ntTSL 5 BASIC27.82■■■□□ 2.04
ABCA6Q8N139 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
ABCA6Q8N139 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
ABCA6Q8N139 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC27.81■■■□□ 2.04
ABCA6Q8N139 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
ABCA6Q8N139 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC27.81■■■□□ 2.04
ABCA6Q8N139 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC27.81■■■□□ 2.04
ABCA6Q8N139 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
ABCA6Q8N139 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC27.81■■■□□ 2.04
ABCA6Q8N139 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ABCA6Q8N139 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ABCA6Q8N139 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ABCA6Q8N139 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ABCA6Q8N139 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ABCA6Q8N139 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
ABCA6Q8N139 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC27.81■■■□□ 2.04
ABCA6Q8N139 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC27.81■■■□□ 2.04
ABCA6Q8N139 AC145285.3-201ENST00000564603 959 ntBASIC27.81■■■□□ 2.04
ABCA6Q8N139 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
ABCA6Q8N139 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
ABCA6Q8N139 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ABCA6Q8N139 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
ABCA6Q8N139 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ABCA6Q8N139 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ABCA6Q8N139 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC27.8■■■□□ 2.04
ABCA6Q8N139 FGFR3P6-201ENST00000457012 610 ntBASIC27.8■■■□□ 2.04
ABCA6Q8N139 PAM16-208ENST00000573553 722 ntTSL 2 BASIC27.8■■■□□ 2.04
ABCA6Q8N139 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC27.8■■■□□ 2.04
ABCA6Q8N139 PIN1-206ENST00000587625 878 ntTSL 2 BASIC27.8■■■□□ 2.04
ABCA6Q8N139 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
ABCA6Q8N139 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
ABCA6Q8N139 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ABCA6Q8N139 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC27.79■■■□□ 2.04
ABCA6Q8N139 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
ABCA6Q8N139 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC27.79■■■□□ 2.04
ABCA6Q8N139 MINOS1P3-201ENST00000457048 203 ntBASIC27.79■■■□□ 2.04
ABCA6Q8N139 TERC-201ENST00000602385 541 ntBASIC27.79■■■□□ 2.04
ABCA6Q8N139 AC034236.2-201ENST00000606662 1610 ntBASIC27.79■■■□□ 2.04
ABCA6Q8N139 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
ABCA6Q8N139 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ABCA6Q8N139 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
ABCA6Q8N139 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
ABCA6Q8N139 FABP5-202ENST00000396359 986 ntTSL 5 BASIC27.78■■■□□ 2.04
ABCA6Q8N139 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
ABCA6Q8N139 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC27.78■■■□□ 2.04
ABCA6Q8N139 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ABCA6Q8N139 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC27.78■■■□□ 2.04
ABCA6Q8N139 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC27.78■■■□□ 2.04
ABCA6Q8N139 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC27.78■■■□□ 2.04
ABCA6Q8N139 PMS2P7-201ENST00000506558 1336 ntBASIC27.78■■■□□ 2.04
ABCA6Q8N139 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
ABCA6Q8N139 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ABCA6Q8N139 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
ABCA6Q8N139 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC27.78■■■□□ 2.04
ABCA6Q8N139 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC27.78■■■□□ 2.04
ABCA6Q8N139 HOTTIP_1.1-201ENST00000620415 57 ntBASIC27.78■■■□□ 2.04
ABCA6Q8N139 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
ABCA6Q8N139 AC006333.2-201ENST00000607957 2099 ntBASIC27.77■■■□□ 2.04
ABCA6Q8N139 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC27.77■■■□□ 2.04
ABCA6Q8N139 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ABCA6Q8N139 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC27.77■■■□□ 2.04
ABCA6Q8N139 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ABCA6Q8N139 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ABCA6Q8N139 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ABCA6Q8N139 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ABCA6Q8N139 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ABCA6Q8N139 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC27.77■■■□□ 2.04
ABCA6Q8N139 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ABCA6Q8N139 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
ABCA6Q8N139 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
ABCA6Q8N139 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC27.76■■■□□ 2.03
ABCA6Q8N139 CYP51A1P1-201ENST00000492267 1507 ntBASIC27.76■■■□□ 2.03
ABCA6Q8N139 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
ABCA6Q8N139 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC27.76■■■□□ 2.03
ABCA6Q8N139 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ABCA6Q8N139 HNRNPDP1-201ENST00000439535 754 ntBASIC27.76■■■□□ 2.03
ABCA6Q8N139 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC27.76■■■□□ 2.03
ABCA6Q8N139 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC27.76■■■□□ 2.03
ABCA6Q8N139 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ABCA6Q8N139 IGHV3-22-201ENST00000520721 359 ntBASIC27.76■■■□□ 2.03
ABCA6Q8N139 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ABCA6Q8N139 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC27.76■■■□□ 2.03
ABCA6Q8N139 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ABCA6Q8N139 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC27.76■■■□□ 2.03
ABCA6Q8N139 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA6Q8N139 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA6Q8N139 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA6Q8N139 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
ABCA6Q8N139 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC27.75■■■□□ 2.03
ABCA6Q8N139 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC27.75■■■□□ 2.03
ABCA6Q8N139 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC27.75■■■□□ 2.03
ABCA6Q8N139 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ABCA6Q8N139 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC27.75■■■□□ 2.03
ABCA6Q8N139 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms