Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.89■□□□□ 0.77
RNF135Q8IUD6 AC079781.3-201ENST00000449110 356 ntBASIC19.89■□□□□ 0.77
RNF135Q8IUD6 AC092597.1-201ENST00000487352 616 ntBASIC19.89■□□□□ 0.77
RNF135Q8IUD6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.89■□□□□ 0.77
RNF135Q8IUD6 AC079776.4-201ENST00000511039 504 ntBASIC19.89■□□□□ 0.77
RNF135Q8IUD6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF135Q8IUD6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF135Q8IUD6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
RNF135Q8IUD6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
RNF135Q8IUD6 AP002414.4-201ENST00000589764 1148 ntBASIC19.89■□□□□ 0.77
RNF135Q8IUD6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF135Q8IUD6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF135Q8IUD6 AL732292.2-201ENST00000609649 430 ntBASIC19.89■□□□□ 0.77
RNF135Q8IUD6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF135Q8IUD6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF135Q8IUD6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF135Q8IUD6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF135Q8IUD6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 TMEM179-206ENST00000616017 1645 ntBASIC19.88■□□□□ 0.77
RNF135Q8IUD6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 KRT8P8-201ENST00000434750 1448 ntBASIC19.88■□□□□ 0.77
RNF135Q8IUD6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 TSPY19P-201ENST00000418461 509 ntBASIC19.88■□□□□ 0.77
RNF135Q8IUD6 TSPY18P-201ENST00000441642 509 ntBASIC19.88■□□□□ 0.77
RNF135Q8IUD6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RNF135Q8IUD6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RNF135Q8IUD6 AC125437.2-201ENST00000625180 2167 ntBASIC19.87■□□□□ 0.77
RNF135Q8IUD6 AC007952.6-201ENST00000573168 2673 ntBASIC19.87■□□□□ 0.77
RNF135Q8IUD6 AC003957.1-201ENST00000625108 2673 ntBASIC19.87■□□□□ 0.77
RNF135Q8IUD6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RNF135Q8IUD6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF135Q8IUD6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms