Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.05■□□□□ 0.32
ATG4DQ86TL0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.05■□□□□ 0.32
ATG4DQ86TL0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATG4DQ86TL0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATG4DQ86TL0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATG4DQ86TL0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATG4DQ86TL0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATG4DQ86TL0 RCC2P3-201ENST00000418112 1537 ntBASIC17.05■□□□□ 0.32
ATG4DQ86TL0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.05■□□□□ 0.32
ATG4DQ86TL0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATG4DQ86TL0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ATG4DQ86TL0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ATG4DQ86TL0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 AC005082.1-201ENST00000413042 2259 ntBASIC17.04■□□□□ 0.32
ATG4DQ86TL0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.04■□□□□ 0.32
ATG4DQ86TL0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 AC009113.1-201ENST00000570267 2443 ntBASIC17.04■□□□□ 0.32
ATG4DQ86TL0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 AC133561.5-201ENST00000635547 218 ntBASIC17.04■□□□□ 0.32
ATG4DQ86TL0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.04■□□□□ 0.32
ATG4DQ86TL0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 AC104581.1-202ENST00000635932 2618 ntBASIC17.03■□□□□ 0.32
ATG4DQ86TL0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 AC008622.2-201ENST00000617006 1229 ntBASIC17.03■□□□□ 0.32
ATG4DQ86TL0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 AC090164.3-201ENST00000610780 2143 ntBASIC17.03■□□□□ 0.32
ATG4DQ86TL0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 KRT8P9-201ENST00000558927 1449 ntBASIC17.03■□□□□ 0.32
ATG4DQ86TL0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 AL357033.4-201ENST00000617703 1807 ntBASIC17.03■□□□□ 0.32
ATG4DQ86TL0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.03■□□□□ 0.32
ATG4DQ86TL0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 AC079598.2-202ENST00000546624 1451 ntBASIC17.02■□□□□ 0.32
ATG4DQ86TL0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 CA15P1-201ENST00000481698 905 ntBASIC17.02■□□□□ 0.32
ATG4DQ86TL0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 AP005242.2-201ENST00000580065 1175 ntBASIC17.02■□□□□ 0.32
ATG4DQ86TL0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.02■□□□□ 0.32
ATG4DQ86TL0 AP000525.1-201ENST00000608286 694 ntBASIC17.02■□□□□ 0.32
ATG4DQ86TL0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATG4DQ86TL0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms