Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 AC131212.4-201ENST00000623606 975 ntBASIC17.12■□□□□ 0.33
NIPAL3Q6P499 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 KRT16P1-201ENST00000399124 1418 ntBASIC17.12■□□□□ 0.33
NIPAL3Q6P499 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NIPAL3Q6P499 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.11■□□□□ 0.33
NIPAL3Q6P499 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 AC008550.1-201ENST00000511500 884 ntBASIC17.11■□□□□ 0.33
NIPAL3Q6P499 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 AP001412.1-201ENST00000608405 714 ntBASIC17.11■□□□□ 0.33
NIPAL3Q6P499 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NIPAL3Q6P499 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 MIR718-201ENST00000390190 70 ntBASIC17.1■□□□□ 0.33
NIPAL3Q6P499 FAM197Y1-201ENST00000421178 764 ntBASIC17.1■□□□□ 0.33
NIPAL3Q6P499 AC012618.2-201ENST00000428058 849 ntBASIC17.1■□□□□ 0.33
NIPAL3Q6P499 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NIPAL3Q6P499 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 AC004980.1-204ENST00000429707 299 ntBASIC17.09■□□□□ 0.33
NIPAL3Q6P499 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.09■□□□□ 0.33
NIPAL3Q6P499 AC233702.5-201ENST00000584107 538 ntBASIC17.09■□□□□ 0.33
NIPAL3Q6P499 Z99916.2-201ENST00000604037 246 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms