Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 GUSBP12-201ENST00000513727 720 ntBASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 AL592071.1-201ENST00000611956 408 ntBASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.42■□□□□ 0.54
LYSMD4Q5XG99 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 IGHGP-201ENST00000390555 1178 ntBASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 MIR3180-4-201ENST00000582223 153 ntBASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 AC120114.3-201ENST00000611923 658 ntBASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 AC124864.1-201ENST00000623408 392 ntBASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.41■□□□□ 0.54
LYSMD4Q5XG99 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 IGHV3-47-201ENST00000425060 335 ntBASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 AC034236.2-201ENST00000606662 1610 ntBASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.4■□□□□ 0.54
LYSMD4Q5XG99 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 AP000593.1-201ENST00000393668 712 ntBASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 SAPCD2P3-201ENST00000455031 850 ntBASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 AC024563.2-201ENST00000603282 481 ntBASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 HLA-A-201ENST00000376802 1334 ntBASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYSMD4Q5XG99 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYSMD4Q5XG99 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms