Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL035252.4-201ENST00000624174 288 ntBASIC16.27■□□□□ 0.2
LRRK2Q5S007 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRK2Q5S007 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRK2Q5S007 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LRRK2Q5S007 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRK2Q5S007 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRK2Q5S007 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRK2Q5S007 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRK2Q5S007 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRK2Q5S007 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRK2Q5S007 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRK2Q5S007 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRK2Q5S007 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.27■□□□□ 0.2
LRRK2Q5S007 YBX1P5-201ENST00000509441 847 ntBASIC16.27■□□□□ 0.2
LRRK2Q5S007 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRK2Q5S007 AC190387.1-201ENST00000551683 408 ntBASIC16.27■□□□□ 0.2
LRRK2Q5S007 IGHV3-41-201ENST00000613121 348 ntBASIC16.27■□□□□ 0.2
LRRK2Q5S007 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
LRRK2Q5S007 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
LRRK2Q5S007 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRK2Q5S007 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRK2Q5S007 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 RPS2P1-201ENST00000434010 821 ntBASIC16.26■□□□□ 0.19
LRRK2Q5S007 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.26■□□□□ 0.19
LRRK2Q5S007 RNA5SP416-201ENST00000516838 111 ntBASIC16.26■□□□□ 0.19
LRRK2Q5S007 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 SNHG9-202ENST00000564014 471 ntBASIC16.26■□□□□ 0.19
LRRK2Q5S007 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 AC024563.2-201ENST00000603282 481 ntBASIC16.26■□□□□ 0.19
LRRK2Q5S007 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.26■□□□□ 0.19
LRRK2Q5S007 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
LRRK2Q5S007 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 AP005117.1-201ENST00000584346 1413 ntBASIC16.26■□□□□ 0.19
LRRK2Q5S007 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRK2Q5S007 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRK2Q5S007 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LRRK2Q5S007 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRK2Q5S007 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRK2Q5S007 AP003733.1-201ENST00000491725 852 ntBASIC16.25■□□□□ 0.19
LRRK2Q5S007 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
LRRK2Q5S007 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRK2Q5S007 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRK2Q5S007 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRK2Q5S007 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRK2Q5S007 AL353692.3-201ENST00000407031 1396 ntBASIC16.25■□□□□ 0.19
LRRK2Q5S007 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRK2Q5S007 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
LRRK2Q5S007 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRK2Q5S007 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRK2Q5S007 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRK2Q5S007 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRK2Q5S007 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
LRRK2Q5S007 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.25■□□□□ 0.19
LRRK2Q5S007 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRK2Q5S007 AC009533.2-201ENST00000543664 586 ntBASIC16.25■□□□□ 0.19
LRRK2Q5S007 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRK2Q5S007 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRK2Q5S007 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRK2Q5S007 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRK2Q5S007 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LRRK2Q5S007 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRK2Q5S007 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 AC254562.1-201ENST00000417586 456 ntBASIC16.24■□□□□ 0.19
LRRK2Q5S007 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 AL391422.3-201ENST00000603791 2761 ntBASIC16.24■□□□□ 0.19
LRRK2Q5S007 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRK2Q5S007 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRK2Q5S007 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms