Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GCNT1Q02742 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.06■□□□□ 0.8
GCNT1Q02742 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GCNT1Q02742 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GCNT1Q02742 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.06■□□□□ 0.8
GCNT1Q02742 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.06■□□□□ 0.8
GCNT1Q02742 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.06■□□□□ 0.8
GCNT1Q02742 KRT18P41-201ENST00000518924 1277 ntBASIC20.06■□□□□ 0.8
GCNT1Q02742 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.06■□□□□ 0.8
GCNT1Q02742 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.06■□□□□ 0.8
GCNT1Q02742 MYC-208ENST00000641036 567 ntBASIC20.06■□□□□ 0.8
GCNT1Q02742 AC116562.4-202ENST00000641738 218 ntBASIC20.06■□□□□ 0.8
GCNT1Q02742 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.06■□□□□ 0.8
GCNT1Q02742 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.06■□□□□ 0.8
GCNT1Q02742 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GCNT1Q02742 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
GCNT1Q02742 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GCNT1Q02742 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNT1Q02742 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNT1Q02742 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNT1Q02742 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.05■□□□□ 0.8
GCNT1Q02742 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNT1Q02742 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNT1Q02742 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
GCNT1Q02742 AC112777.1-201ENST00000540175 1423 ntBASIC20.05■□□□□ 0.8
GCNT1Q02742 AC073592.3-201ENST00000625118 1834 ntBASIC20.05■□□□□ 0.8
GCNT1Q02742 MIR564-202ENST00000385049 94 ntBASIC20.05■□□□□ 0.8
GCNT1Q02742 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.05■□□□□ 0.8
GCNT1Q02742 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNT1Q02742 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.05■□□□□ 0.8
GCNT1Q02742 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.05■□□□□ 0.8
GCNT1Q02742 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.05■□□□□ 0.8
GCNT1Q02742 AP003041.3-201ENST00000527151 707 ntBASIC20.05■□□□□ 0.8
GCNT1Q02742 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.05■□□□□ 0.8
GCNT1Q02742 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
GCNT1Q02742 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.05■□□□□ 0.8
GCNT1Q02742 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.05■□□□□ 0.8
GCNT1Q02742 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNT1Q02742 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.05■□□□□ 0.8
GCNT1Q02742 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNT1Q02742 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNT1Q02742 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.05■□□□□ 0.8
GCNT1Q02742 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GCNT1Q02742 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
GCNT1Q02742 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.04■□□□□ 0.8
GCNT1Q02742 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GCNT1Q02742 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCNT1Q02742 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GCNT1Q02742 AL499627.1-201ENST00000569373 2188 ntBASIC20.04■□□□□ 0.8
GCNT1Q02742 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
GCNT1Q02742 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GCNT1Q02742 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCNT1Q02742 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GCNT1Q02742 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
GCNT1Q02742 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.04■□□□□ 0.8
GCNT1Q02742 EGLN1P1-201ENST00000531623 762 ntBASIC20.04■□□□□ 0.8
GCNT1Q02742 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GCNT1Q02742 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.04■□□□□ 0.8
GCNT1Q02742 MIR3180-5-201ENST00000583743 153 ntBASIC20.04■□□□□ 0.8
GCNT1Q02742 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.04■□□□□ 0.8
GCNT1Q02742 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.04■□□□□ 0.8
GCNT1Q02742 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
GCNT1Q02742 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
GCNT1Q02742 AC005082.1-201ENST00000413042 2259 ntBASIC20.04■□□□□ 0.8
GCNT1Q02742 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.04■□□□□ 0.8
GCNT1Q02742 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
GCNT1Q02742 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.03■□□□□ 0.8
GCNT1Q02742 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GCNT1Q02742 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.03■□□□□ 0.8
GCNT1Q02742 MMP23A-201ENST00000234610 1017 ntBASIC20.03■□□□□ 0.8
GCNT1Q02742 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.03■□□□□ 0.8
GCNT1Q02742 AC007663.1-201ENST00000438948 1240 ntBASIC20.03■□□□□ 0.8
GCNT1Q02742 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GCNT1Q02742 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 BX088651.1-201ENST00000540551 451 ntBASIC20.03■□□□□ 0.8
GCNT1Q02742 AC010653.2-201ENST00000623505 997 ntBASIC20.03■□□□□ 0.8
GCNT1Q02742 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
GCNT1Q02742 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
GCNT1Q02742 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GCNT1Q02742 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GCNT1Q02742 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GCNT1Q02742 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GCNT1Q02742 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GCNT1Q02742 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GCNT1Q02742 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.02■□□□□ 0.8
GCNT1Q02742 KRT8P9-201ENST00000558927 1449 ntBASIC20.02■□□□□ 0.8
GCNT1Q02742 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms