Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CDR2Q01850 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR2Q01850 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.02■□□□□ 0.8
CDR2Q01850 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDR2Q01850 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDR2Q01850 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.02■□□□□ 0.8
CDR2Q01850 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDR2Q01850 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.02■□□□□ 0.8
CDR2Q01850 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.02■□□□□ 0.8
CDR2Q01850 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.02■□□□□ 0.8
CDR2Q01850 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.02■□□□□ 0.8
CDR2Q01850 Z99916.2-201ENST00000604037 246 ntBASIC20.02■□□□□ 0.8
CDR2Q01850 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDR2Q01850 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.02■□□□□ 0.8
CDR2Q01850 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDR2Q01850 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDR2Q01850 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR2Q01850 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.02■□□□□ 0.79
CDR2Q01850 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDR2Q01850 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDR2Q01850 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDR2Q01850 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDR2Q01850 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDR2Q01850 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDR2Q01850 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CDR2Q01850 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR2Q01850 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR2Q01850 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
CDR2Q01850 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDR2Q01850 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR2Q01850 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.01■□□□□ 0.79
CDR2Q01850 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.01■□□□□ 0.79
CDR2Q01850 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR2Q01850 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR2Q01850 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDR2Q01850 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR2Q01850 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.01■□□□□ 0.79
CDR2Q01850 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.01■□□□□ 0.79
CDR2Q01850 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.01■□□□□ 0.79
CDR2Q01850 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR2Q01850 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.01■□□□□ 0.79
CDR2Q01850 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.01■□□□□ 0.79
CDR2Q01850 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.01■□□□□ 0.79
CDR2Q01850 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.01■□□□□ 0.79
CDR2Q01850 REXO1L10P-201ENST00000615707 1290 ntBASIC20.01■□□□□ 0.79
CDR2Q01850 REXO1L12P-201ENST00000622156 912 ntBASIC20.01■□□□□ 0.79
CDR2Q01850 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
CDR2Q01850 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CDR2Q01850 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDR2Q01850 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR2Q01850 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.01■□□□□ 0.79
CDR2Q01850 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDR2Q01850 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDR2Q01850 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.01■□□□□ 0.79
CDR2Q01850 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDR2Q01850 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR2Q01850 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20■□□□□ 0.79
CDR2Q01850 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20■□□□□ 0.79
CDR2Q01850 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CDR2Q01850 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR2Q01850 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDR2Q01850 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR2Q01850 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20■□□□□ 0.79
CDR2Q01850 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20■□□□□ 0.79
CDR2Q01850 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
CDR2Q01850 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20■□□□□ 0.79
CDR2Q01850 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20■□□□□ 0.79
CDR2Q01850 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20■□□□□ 0.79
CDR2Q01850 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20■□□□□ 0.79
CDR2Q01850 SLC25A1P4-201ENST00000567977 778 ntBASIC20■□□□□ 0.79
CDR2Q01850 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20■□□□□ 0.79
CDR2Q01850 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR2Q01850 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20■□□□□ 0.79
CDR2Q01850 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20■□□□□ 0.79
CDR2Q01850 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR2Q01850 RCC2P3-201ENST00000418112 1537 ntBASIC20■□□□□ 0.79
CDR2Q01850 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR2Q01850 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR2Q01850 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20■□□□□ 0.79
CDR2Q01850 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDR2Q01850 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDR2Q01850 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20■□□□□ 0.79
CDR2Q01850 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.99■□□□□ 0.79
CDR2Q01850 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.99■□□□□ 0.79
CDR2Q01850 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms