Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CNTNAP1P78357 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CNTNAP1P78357 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC22.35■■□□□ 1.17
CNTNAP1P78357 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
CNTNAP1P78357 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.35■■□□□ 1.17
CNTNAP1P78357 GRAMD4P1-201ENST00000435181 1110 ntBASIC22.35■■□□□ 1.17
CNTNAP1P78357 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC22.35■■□□□ 1.17
CNTNAP1P78357 AC093909.1-201ENST00000504731 1122 ntBASIC22.35■■□□□ 1.17
CNTNAP1P78357 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC22.35■■□□□ 1.17
CNTNAP1P78357 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
CNTNAP1P78357 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.35■■□□□ 1.17
CNTNAP1P78357 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC22.35■■□□□ 1.17
CNTNAP1P78357 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CNTNAP1P78357 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CNTNAP1P78357 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.35■■□□□ 1.17
CNTNAP1P78357 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CNTNAP1P78357 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CNTNAP1P78357 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
CNTNAP1P78357 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CNTNAP1P78357 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.34■■□□□ 1.17
CNTNAP1P78357 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 BAALC-202ENST00000306391 243 ntTSL 5 BASIC22.34■■□□□ 1.17
CNTNAP1P78357 BAALC-204ENST00000330955 222 ntTSL 5 BASIC22.34■■□□□ 1.17
CNTNAP1P78357 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC22.34■■□□□ 1.17
CNTNAP1P78357 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC22.34■■□□□ 1.17
CNTNAP1P78357 RPL13AP23-201ENST00000480739 586 ntBASIC22.34■■□□□ 1.17
CNTNAP1P78357 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 PGAM5P1-201ENST00000518923 814 ntBASIC22.34■■□□□ 1.17
CNTNAP1P78357 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNTNAP1P78357 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
CNTNAP1P78357 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.34■■□□□ 1.17
CNTNAP1P78357 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.34■■□□□ 1.17
CNTNAP1P78357 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.33■■□□□ 1.17
CNTNAP1P78357 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.33■■□□□ 1.17
CNTNAP1P78357 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
CNTNAP1P78357 TEX21P-204ENST00000641479 1693 ntBASIC22.33■■□□□ 1.17
CNTNAP1P78357 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.33■■□□□ 1.17
CNTNAP1P78357 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CNTNAP1P78357 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.33■■□□□ 1.17
CNTNAP1P78357 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CNTNAP1P78357 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.33■■□□□ 1.17
CNTNAP1P78357 Z69720.1-201ENST00000601483 472 ntBASIC22.33■■□□□ 1.17
CNTNAP1P78357 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CNTNAP1P78357 AC148477.8-201ENST00000624298 468 ntBASIC22.33■■□□□ 1.17
CNTNAP1P78357 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
CNTNAP1P78357 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.33■■□□□ 1.16
CNTNAP1P78357 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CNTNAP1P78357 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CNTNAP1P78357 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CNTNAP1P78357 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CNTNAP1P78357 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CNTNAP1P78357 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.33■■□□□ 1.16
CNTNAP1P78357 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNTNAP1P78357 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.32■■□□□ 1.16
CNTNAP1P78357 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.32■■□□□ 1.16
CNTNAP1P78357 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CNTNAP1P78357 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNTNAP1P78357 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.32■■□□□ 1.16
CNTNAP1P78357 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNTNAP1P78357 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNTNAP1P78357 UPF3AP3-201ENST00000420996 769 ntBASIC22.32■■□□□ 1.16
CNTNAP1P78357 IGHV3-47-201ENST00000425060 335 ntBASIC22.32■■□□□ 1.16
CNTNAP1P78357 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC22.32■■□□□ 1.16
CNTNAP1P78357 AC090616.6-201ENST00000582640 721 ntBASIC22.32■■□□□ 1.16
CNTNAP1P78357 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.32■■□□□ 1.16
CNTNAP1P78357 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNTNAP1P78357 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CNTNAP1P78357 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CNTNAP1P78357 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.32■■□□□ 1.16
CNTNAP1P78357 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNTNAP1P78357 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.32■■□□□ 1.16
CNTNAP1P78357 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CNTNAP1P78357 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNTNAP1P78357 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.31■■□□□ 1.16
CNTNAP1P78357 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP1P78357 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP1P78357 ZNF259P1-201ENST00000407656 1365 ntBASIC22.31■■□□□ 1.16
CNTNAP1P78357 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP1P78357 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP1P78357 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP1P78357 HES2-202ENST00000377836 507 ntTSL 2 BASIC22.31■■□□□ 1.16
CNTNAP1P78357 AF186996.4-201ENST00000467186 377 ntBASIC22.31■■□□□ 1.16
CNTNAP1P78357 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.31■■□□□ 1.16
CNTNAP1P78357 AC009065.1-201ENST00000564055 1225 ntBASIC22.31■■□□□ 1.16
CNTNAP1P78357 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CNTNAP1P78357 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP1P78357 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.31■■□□□ 1.16
CNTNAP1P78357 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CNTNAP1P78357 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms