Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.73■□□□□ 0.43
TRA2BP62995 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRA2BP62995 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.73■□□□□ 0.43
TRA2BP62995 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRA2BP62995 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRA2BP62995 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRA2BP62995 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.73■□□□□ 0.43
TRA2BP62995 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRA2BP62995 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRA2BP62995 AL023284.2-201ENST00000405850 579 ntBASIC17.73■□□□□ 0.43
TRA2BP62995 MCCD1P1-208ENST00000445732 328 ntBASIC17.73■□□□□ 0.43
TRA2BP62995 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TRA2BP62995 FITM1-202ENST00000559294 800 ntBASIC17.73■□□□□ 0.43
TRA2BP62995 AC090164.3-201ENST00000610780 2143 ntBASIC17.73■□□□□ 0.43
TRA2BP62995 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRA2BP62995 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.73■□□□□ 0.43
TRA2BP62995 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRA2BP62995 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRA2BP62995 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRA2BP62995 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRA2BP62995 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRA2BP62995 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.73■□□□□ 0.43
TRA2BP62995 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
TRA2BP62995 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRA2BP62995 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRA2BP62995 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRA2BP62995 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.72■□□□□ 0.43
TRA2BP62995 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRA2BP62995 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 SNORA78-201ENST00000459373 127 ntBASIC17.72■□□□□ 0.43
TRA2BP62995 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.72■□□□□ 0.43
TRA2BP62995 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.72■□□□□ 0.43
TRA2BP62995 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.72■□□□□ 0.43
TRA2BP62995 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
TRA2BP62995 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.72■□□□□ 0.43
TRA2BP62995 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRA2BP62995 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.72■□□□□ 0.43
TRA2BP62995 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.72■□□□□ 0.43
TRA2BP62995 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TRA2BP62995 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRA2BP62995 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.72■□□□□ 0.43
TRA2BP62995 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRA2BP62995 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRA2BP62995 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.71■□□□□ 0.43
TRA2BP62995 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.71■□□□□ 0.43
TRA2BP62995 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRA2BP62995 AC079598.2-202ENST00000546624 1451 ntBASIC17.71■□□□□ 0.43
TRA2BP62995 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRA2BP62995 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TRA2BP62995 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.71■□□□□ 0.43
TRA2BP62995 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRA2BP62995 MIR564-202ENST00000385049 94 ntBASIC17.71■□□□□ 0.43
TRA2BP62995 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.71■□□□□ 0.43
TRA2BP62995 TSPY17P-201ENST00000450329 467 ntBASIC17.71■□□□□ 0.43
TRA2BP62995 MIR4497-201ENST00000583208 89 ntBASIC17.71■□□□□ 0.43
TRA2BP62995 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.71■□□□□ 0.43
TRA2BP62995 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRA2BP62995 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.71■□□□□ 0.43
TRA2BP62995 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRA2BP62995 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRA2BP62995 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRA2BP62995 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRA2BP62995 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRA2BP62995 AC008556.1-201ENST00000610908 2040 ntBASIC17.71■□□□□ 0.42
TRA2BP62995 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
TRA2BP62995 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRA2BP62995 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRA2BP62995 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRA2BP62995 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRA2BP62995 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRA2BP62995 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRA2BP62995 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRA2BP62995 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRA2BP62995 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.7■□□□□ 0.42
TRA2BP62995 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.7■□□□□ 0.42
TRA2BP62995 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.7■□□□□ 0.42
TRA2BP62995 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.7■□□□□ 0.42
TRA2BP62995 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.7■□□□□ 0.42
TRA2BP62995 AL353719.1-201ENST00000566847 864 ntBASIC17.7■□□□□ 0.42
TRA2BP62995 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRA2BP62995 AL023803.3-201ENST00000615559 522 ntBASIC17.7■□□□□ 0.42
TRA2BP62995 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRA2BP62995 GPAT2P1-201ENST00000444924 1672 ntBASIC17.7■□□□□ 0.42
TRA2BP62995 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms