Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
FOXA3P55318 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXA3P55318 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
FOXA3P55318 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.12□□□□□ -0.15
FOXA3P55318 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
FOXA3P55318 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.12□□□□□ -0.15
FOXA3P55318 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXA3P55318 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXA3P55318 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
FOXA3P55318 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
FOXA3P55318 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXA3P55318 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXA3P55318 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
FOXA3P55318 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXA3P55318 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
FOXA3P55318 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXA3P55318 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
FOXA3P55318 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
FOXA3P55318 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXA3P55318 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXA3P55318 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
FOXA3P55318 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
FOXA3P55318 LINC00896-202ENST00000609602 2128 ntBASIC14.11□□□□□ -0.15
FOXA3P55318 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXA3P55318 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
FOXA3P55318 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 GNAS-203ENST00000306120 1878 ntBASIC14.1□□□□□ -0.15
FOXA3P55318 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
FOXA3P55318 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXA3P55318 KRT19P1-201ENST00000405746 1186 ntBASIC14.1□□□□□ -0.15
FOXA3P55318 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXA3P55318 RARRES2P4-201ENST00000514074 484 ntBASIC14.1□□□□□ -0.15
FOXA3P55318 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXA3P55318 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXA3P55318 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
FOXA3P55318 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
FOXA3P55318 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXA3P55318 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXA3P55318 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXA3P55318 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA3P55318 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
FOXA3P55318 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA3P55318 AC126763.1-201ENST00000552015 2118 ntBASIC14.09□□□□□ -0.15
FOXA3P55318 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA3P55318 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA3P55318 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
FOXA3P55318 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.09□□□□□ -0.15
FOXA3P55318 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA3P55318 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
FOXA3P55318 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
FOXA3P55318 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms