Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.4■□□□□ 0.7
PMS2P54278 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.4■□□□□ 0.7
PMS2P54278 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.4■□□□□ 0.7
PMS2P54278 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 AC008764.6-201ENST00000595909 2069 ntBASIC19.4■□□□□ 0.7
PMS2P54278 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
PMS2P54278 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.4■□□□□ 0.7
PMS2P54278 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.4■□□□□ 0.7
PMS2P54278 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PMS2P54278 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PMS2P54278 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.39■□□□□ 0.7
PMS2P54278 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
PMS2P54278 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.39■□□□□ 0.7
PMS2P54278 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PMS2P54278 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PMS2P54278 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS2P54278 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS2P54278 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS2P54278 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.39■□□□□ 0.69
PMS2P54278 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.39■□□□□ 0.69
PMS2P54278 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.39■□□□□ 0.69
PMS2P54278 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.39■□□□□ 0.69
PMS2P54278 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
PMS2P54278 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.39■□□□□ 0.69
PMS2P54278 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.39■□□□□ 0.69
PMS2P54278 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS2P54278 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PMS2P54278 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PMS2P54278 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.39■□□□□ 0.69
PMS2P54278 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
PMS2P54278 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PMS2P54278 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS2P54278 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS2P54278 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS2P54278 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS2P54278 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PMS2P54278 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PMS2P54278 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PMS2P54278 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.39■□□□□ 0.69
PMS2P54278 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.38■□□□□ 0.69
PMS2P54278 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PMS2P54278 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.38■□□□□ 0.69
PMS2P54278 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.38■□□□□ 0.69
PMS2P54278 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.38■□□□□ 0.69
PMS2P54278 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.38■□□□□ 0.69
PMS2P54278 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.38■□□□□ 0.69
PMS2P54278 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PMS2P54278 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.38■□□□□ 0.69
PMS2P54278 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.38■□□□□ 0.69
PMS2P54278 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 AC006557.6-201ENST00000623071 864 ntBASIC19.38■□□□□ 0.69
PMS2P54278 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PMS2P54278 AC073648.6-201ENST00000641589 218 ntBASIC19.38■□□□□ 0.69
PMS2P54278 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PMS2P54278 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PMS2P54278 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PMS2P54278 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS2P54278 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.37■□□□□ 0.69
PMS2P54278 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS2P54278 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS2P54278 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS2P54278 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.37■□□□□ 0.69
PMS2P54278 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS2P54278 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.37■□□□□ 0.69
PMS2P54278 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS2P54278 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS2P54278 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PMS2P54278 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS2P54278 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PMS2P54278 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS2P54278 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PMS2P54278 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.37■□□□□ 0.69
PMS2P54278 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PMS2P54278 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms