Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC26.89■■□□□ 1.9
CLTCL1P53675 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC26.89■■□□□ 1.9
CLTCL1P53675 AC004870.1-201ENST00000315132 882 ntBASIC26.89■■□□□ 1.9
CLTCL1P53675 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
CLTCL1P53675 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CLTCL1P53675 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC26.89■■□□□ 1.9
CLTCL1P53675 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC26.89■■□□□ 1.9
CLTCL1P53675 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CLTCL1P53675 PNN-202ENST00000553331 656 ntTSL 3 BASIC26.89■■□□□ 1.9
CLTCL1P53675 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
CLTCL1P53675 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.89
CLTCL1P53675 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
CLTCL1P53675 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CLTCL1P53675 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC26.88■■□□□ 1.89
CLTCL1P53675 TSPY12P-201ENST00000421279 868 ntBASIC26.88■■□□□ 1.89
CLTCL1P53675 EMBP1-201ENST00000458200 901 ntBASIC26.88■■□□□ 1.89
CLTCL1P53675 AC074051.2-201ENST00000565115 352 ntBASIC26.88■■□□□ 1.89
CLTCL1P53675 MIR3180-4-201ENST00000582223 153 ntBASIC26.88■■□□□ 1.89
CLTCL1P53675 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CLTCL1P53675 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CLTCL1P53675 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CLTCL1P53675 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC26.88■■□□□ 1.89
CLTCL1P53675 AC233702.3-201ENST00000578656 1387 ntBASIC26.88■■□□□ 1.89
CLTCL1P53675 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC26.87■■□□□ 1.89
CLTCL1P53675 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CLTCL1P53675 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CLTCL1P53675 IGHGP-201ENST00000390555 1178 ntBASIC26.87■■□□□ 1.89
CLTCL1P53675 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC26.87■■□□□ 1.89
CLTCL1P53675 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC26.87■■□□□ 1.89
CLTCL1P53675 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CLTCL1P53675 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC26.87■■□□□ 1.89
CLTCL1P53675 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC26.87■■□□□ 1.89
CLTCL1P53675 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CLTCL1P53675 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CLTCL1P53675 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CLTCL1P53675 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CLTCL1P53675 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC26.87■■□□□ 1.89
CLTCL1P53675 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CLTCL1P53675 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC26.87■■□□□ 1.89
CLTCL1P53675 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CLTCL1P53675 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
CLTCL1P53675 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CLTCL1P53675 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC26.87■■□□□ 1.89
CLTCL1P53675 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CLTCL1P53675 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CLTCL1P53675 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC26.87■■□□□ 1.89
CLTCL1P53675 AL845331.1-201ENST00000424978 1190 ntBASIC26.87■■□□□ 1.89
CLTCL1P53675 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC26.87■■□□□ 1.89
CLTCL1P53675 AP003733.1-201ENST00000491725 852 ntBASIC26.87■■□□□ 1.89
CLTCL1P53675 AP000867.3-201ENST00000524675 377 ntBASIC26.87■■□□□ 1.89
CLTCL1P53675 AP005901.3-202ENST00000581653 237 ntBASIC26.87■■□□□ 1.89
CLTCL1P53675 TBCB-205ENST00000585746 875 ntTSL 3 BASIC26.87■■□□□ 1.89
CLTCL1P53675 AC138894.3-201ENST00000603787 634 ntBASIC26.87■■□□□ 1.89
CLTCL1P53675 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC26.86■■□□□ 1.89
CLTCL1P53675 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
CLTCL1P53675 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
CLTCL1P53675 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CLTCL1P53675 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC26.86■■□□□ 1.89
CLTCL1P53675 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CLTCL1P53675 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC26.86■■□□□ 1.89
CLTCL1P53675 AC091607.1-201ENST00000490318 1060 ntBASIC26.86■■□□□ 1.89
CLTCL1P53675 KRT18P41-201ENST00000518924 1277 ntBASIC26.86■■□□□ 1.89
CLTCL1P53675 IL11-204ENST00000590625 1028 ntTSL 2 BASIC26.86■■□□□ 1.89
CLTCL1P53675 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CLTCL1P53675 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC26.86■■□□□ 1.89
CLTCL1P53675 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CLTCL1P53675 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CLTCL1P53675 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CLTCL1P53675 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CLTCL1P53675 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CLTCL1P53675 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC26.85■■□□□ 1.89
CLTCL1P53675 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC26.85■■□□□ 1.89
CLTCL1P53675 BET1L-206ENST00000486280 665 ntTSL 3 BASIC26.85■■□□□ 1.89
CLTCL1P53675 KLK8-205ENST00000593490 267 ntTSL 3 BASIC26.85■■□□□ 1.89
CLTCL1P53675 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CLTCL1P53675 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC26.85■■□□□ 1.89
CLTCL1P53675 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CLTCL1P53675 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CLTCL1P53675 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC26.85■■□□□ 1.89
CLTCL1P53675 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CLTCL1P53675 NFYC-AS1-201ENST00000606277 1687 ntBASIC26.85■■□□□ 1.89
CLTCL1P53675 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CLTCL1P53675 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CLTCL1P53675 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CLTCL1P53675 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
CLTCL1P53675 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CLTCL1P53675 NUS1P1-201ENST00000446295 882 ntBASIC26.84■■□□□ 1.89
CLTCL1P53675 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CLTCL1P53675 BMF-207ENST00000559701 630 ntTSL 3 BASIC26.84■■□□□ 1.89
CLTCL1P53675 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC26.84■■□□□ 1.89
CLTCL1P53675 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CLTCL1P53675 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CLTCL1P53675 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC26.84■■□□□ 1.89
CLTCL1P53675 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CLTCL1P53675 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CLTCL1P53675 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC26.83■■□□□ 1.89
CLTCL1P53675 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC26.83■■□□□ 1.89
CLTCL1P53675 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CLTCL1P53675 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CLTCL1P53675 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms