Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLK1P49759 AC133681.1-201ENST00000465482 601 ntBASIC17.64■□□□□ 0.41
CLK1P49759 KRT18P16-201ENST00000510337 1294 ntBASIC17.64■□□□□ 0.41
CLK1P49759 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.64■□□□□ 0.41
CLK1P49759 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLK1P49759 ITM2C-210ENST00000620962 501 ntBASIC17.64■□□□□ 0.41
CLK1P49759 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLK1P49759 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLK1P49759 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLK1P49759 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CLK1P49759 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.64■□□□□ 0.41
CLK1P49759 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLK1P49759 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLK1P49759 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLK1P49759 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLK1P49759 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLK1P49759 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLK1P49759 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.64■□□□□ 0.41
CLK1P49759 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
CLK1P49759 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLK1P49759 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CLK1P49759 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLK1P49759 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.63■□□□□ 0.41
CLK1P49759 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CLK1P49759 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLK1P49759 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CLK1P49759 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.63■□□□□ 0.41
CLK1P49759 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.63■□□□□ 0.41
CLK1P49759 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.63■□□□□ 0.41
CLK1P49759 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CLK1P49759 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.63■□□□□ 0.41
CLK1P49759 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLK1P49759 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.63■□□□□ 0.41
CLK1P49759 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLK1P49759 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLK1P49759 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLK1P49759 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLK1P49759 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CLK1P49759 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLK1P49759 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLK1P49759 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLK1P49759 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.62■□□□□ 0.41
CLK1P49759 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.62■□□□□ 0.41
CLK1P49759 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLK1P49759 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.62■□□□□ 0.41
CLK1P49759 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 TUBB8P6-201ENST00000436895 1288 ntBASIC17.62■□□□□ 0.41
CLK1P49759 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.62■□□□□ 0.41
CLK1P49759 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.62■□□□□ 0.41
CLK1P49759 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.62■□□□□ 0.41
CLK1P49759 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.62■□□□□ 0.41
CLK1P49759 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLK1P49759 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.62■□□□□ 0.41
CLK1P49759 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLK1P49759 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.62■□□□□ 0.41
CLK1P49759 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLK1P49759 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLK1P49759 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLK1P49759 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLK1P49759 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.61■□□□□ 0.41
CLK1P49759 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.61■□□□□ 0.41
CLK1P49759 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLK1P49759 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.61■□□□□ 0.41
CLK1P49759 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLK1P49759 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLK1P49759 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.61■□□□□ 0.41
CLK1P49759 KRT18P29-201ENST00000397031 1267 ntBASIC17.61■□□□□ 0.41
CLK1P49759 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLK1P49759 AC239809.2-201ENST00000415381 517 ntBASIC17.61■□□□□ 0.41
CLK1P49759 TSPY20P-201ENST00000450910 630 ntBASIC17.61■□□□□ 0.41
CLK1P49759 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms