Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXC8P31273 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXC8P31273 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.51■□□□□ 0.87
HOXC8P31273 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 IGHGP-201ENST00000390555 1178 ntBASIC20.51■□□□□ 0.87
HOXC8P31273 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXC8P31273 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXC8P31273 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.51■□□□□ 0.87
HOXC8P31273 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXC8P31273 AC090616.6-201ENST00000582640 721 ntBASIC20.51■□□□□ 0.87
HOXC8P31273 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HOXC8P31273 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.51■□□□□ 0.87
HOXC8P31273 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXC8P31273 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HOXC8P31273 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXC8P31273 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXC8P31273 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HOXC8P31273 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXC8P31273 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC8P31273 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC8P31273 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC8P31273 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.5■□□□□ 0.87
HOXC8P31273 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC8P31273 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HOXC8P31273 TOB2P1-201ENST00000469761 992 ntBASIC20.5■□□□□ 0.87
HOXC8P31273 KRT18P41-201ENST00000518924 1277 ntBASIC20.5■□□□□ 0.87
HOXC8P31273 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXC8P31273 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.5■□□□□ 0.87
HOXC8P31273 GPR32P1-201ENST00000601788 811 ntBASIC20.5■□□□□ 0.87
HOXC8P31273 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.5■□□□□ 0.87
HOXC8P31273 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC8P31273 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC8P31273 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC8P31273 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC8P31273 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC8P31273 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC8P31273 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC8P31273 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXC8P31273 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC8P31273 Z98044.1-201ENST00000632503 1764 ntBASIC20.49■□□□□ 0.87
HOXC8P31273 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC8P31273 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC8P31273 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC8P31273 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC8P31273 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC8P31273 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC8P31273 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC8P31273 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC8P31273 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.49■□□□□ 0.87
HOXC8P31273 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC8P31273 AC004870.1-201ENST00000315132 882 ntBASIC20.49■□□□□ 0.87
HOXC8P31273 AL845331.1-201ENST00000424978 1190 ntBASIC20.49■□□□□ 0.87
HOXC8P31273 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.49■□□□□ 0.87
HOXC8P31273 LINC00265-3P-201ENST00000447588 903 ntBASIC20.49■□□□□ 0.87
HOXC8P31273 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC8P31273 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.49■□□□□ 0.87
HOXC8P31273 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.49■□□□□ 0.87
HOXC8P31273 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC8P31273 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC8P31273 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC8P31273 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.49■□□□□ 0.87
HOXC8P31273 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.49■□□□□ 0.87
HOXC8P31273 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.49■□□□□ 0.87
HOXC8P31273 IFNL4P1-201ENST00000607083 540 ntBASIC20.49■□□□□ 0.87
HOXC8P31273 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC8P31273 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.49■□□□□ 0.87
HOXC8P31273 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC8P31273 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC8P31273 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HOXC8P31273 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC8P31273 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC8P31273 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.49■□□□□ 0.87
HOXC8P31273 KRT89P-201ENST00000620027 1478 ntBASIC20.49■□□□□ 0.87
HOXC8P31273 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
HOXC8P31273 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 HEIH-201ENST00000623091 1652 ntBASIC20.48■□□□□ 0.87
HOXC8P31273 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HOXC8P31273 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 KRT8P50-201ENST00000562022 1438 ntBASIC20.48■□□□□ 0.87
HOXC8P31273 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 RN7SL606P-201ENST00000472779 293 ntBASIC20.48■□□□□ 0.87
HOXC8P31273 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 AL732292.2-201ENST00000609649 430 ntBASIC20.48■□□□□ 0.87
HOXC8P31273 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HOXC8P31273 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXC8P31273 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms