Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 AC106820.2-201ENST00000563775 3264 ntBASIC18.46■□□□□ 0.55
VARSP26640 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.46■□□□□ 0.55
VARSP26640 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
VARSP26640 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.46■□□□□ 0.55
VARSP26640 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.46■□□□□ 0.55
VARSP26640 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.46■□□□□ 0.55
VARSP26640 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
VARSP26640 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VARSP26640 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.46■□□□□ 0.55
VARSP26640 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
VARSP26640 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VARSP26640 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VARSP26640 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.46■□□□□ 0.55
VARSP26640 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.45■□□□□ 0.54
VARSP26640 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.45■□□□□ 0.54
VARSP26640 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
VARSP26640 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
VARSP26640 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
VARSP26640 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.45■□□□□ 0.54
VARSP26640 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.45■□□□□ 0.54
VARSP26640 KSR1P1-201ENST00000446298 240 ntBASIC18.45■□□□□ 0.54
VARSP26640 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
VARSP26640 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 AC131212.4-201ENST00000623606 975 ntBASIC18.45■□□□□ 0.54
VARSP26640 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.45■□□□□ 0.54
VARSP26640 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
VARSP26640 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VARSP26640 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.44■□□□□ 0.54
VARSP26640 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
VARSP26640 KRT16P1-201ENST00000399124 1418 ntBASIC18.44■□□□□ 0.54
VARSP26640 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.44■□□□□ 0.54
VARSP26640 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.44■□□□□ 0.54
VARSP26640 AL355355.2-201ENST00000442321 338 ntBASIC18.44■□□□□ 0.54
VARSP26640 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.44■□□□□ 0.54
VARSP26640 AC073195.1-201ENST00000607241 877 ntBASIC18.44■□□□□ 0.54
VARSP26640 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.44■□□□□ 0.54
VARSP26640 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
VARSP26640 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.44■□□□□ 0.54
VARSP26640 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.44■□□□□ 0.54
VARSP26640 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VARSP26640 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARSP26640 AP000997.3-201ENST00000623333 2250 ntBASIC18.43■□□□□ 0.54
VARSP26640 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARSP26640 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
VARSP26640 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARSP26640 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARSP26640 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARSP26640 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARSP26640 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VARSP26640 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.43■□□□□ 0.54
VARSP26640 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.43■□□□□ 0.54
VARSP26640 TSPY23P-201ENST00000440136 739 ntBASIC18.43■□□□□ 0.54
VARSP26640 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.43■□□□□ 0.54
VARSP26640 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.43■□□□□ 0.54
VARSP26640 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.43■□□□□ 0.54
VARSP26640 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.43■□□□□ 0.54
VARSP26640 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.43■□□□□ 0.54
VARSP26640 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARSP26640 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.43■□□□□ 0.54
VARSP26640 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARSP26640 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VARSP26640 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
VARSP26640 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.43■□□□□ 0.54
VARSP26640 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARSP26640 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VARSP26640 FP475955.4-201ENST00000623131 1990 ntBASIC18.42■□□□□ 0.54
VARSP26640 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VARSP26640 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms