Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN3P26045 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PTPN3P26045 AC104581.1-202ENST00000635932 2618 ntBASIC19.16■□□□□ 0.66
PTPN3P26045 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.16■□□□□ 0.66
PTPN3P26045 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN3P26045 AP005242.2-201ENST00000580065 1175 ntBASIC19.16■□□□□ 0.66
PTPN3P26045 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PTPN3P26045 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PTPN3P26045 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN3P26045 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN3P26045 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PTPN3P26045 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
PTPN3P26045 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 AC009113.1-201ENST00000570267 2443 ntBASIC19.15■□□□□ 0.66
PTPN3P26045 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN3P26045 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPN3P26045 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.15■□□□□ 0.66
PTPN3P26045 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PTPN3P26045 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTPN3P26045 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 AC005082.1-201ENST00000413042 2259 ntBASIC19.15■□□□□ 0.66
PTPN3P26045 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTPN3P26045 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PTPN3P26045 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.15■□□□□ 0.66
PTPN3P26045 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.15■□□□□ 0.66
PTPN3P26045 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.15■□□□□ 0.66
PTPN3P26045 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPN3P26045 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN3P26045 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTPN3P26045 AC079598.2-202ENST00000546624 1451 ntBASIC19.15■□□□□ 0.66
PTPN3P26045 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN3P26045 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN3P26045 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PTPN3P26045 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTPN3P26045 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTPN3P26045 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
PTPN3P26045 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PTPN3P26045 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
PTPN3P26045 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.14■□□□□ 0.66
PTPN3P26045 AL357033.4-201ENST00000617703 1807 ntBASIC19.14■□□□□ 0.65
PTPN3P26045 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN3P26045 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN3P26045 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.14■□□□□ 0.65
PTPN3P26045 UNC93B2-201ENST00000285383 730 ntBASIC19.14■□□□□ 0.65
PTPN3P26045 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN3P26045 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN3P26045 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.14■□□□□ 0.65
PTPN3P26045 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.14■□□□□ 0.65
PTPN3P26045 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN3P26045 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PTPN3P26045 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN3P26045 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.14■□□□□ 0.65
PTPN3P26045 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN3P26045 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.14■□□□□ 0.65
PTPN3P26045 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN3P26045 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN3P26045 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.14■□□□□ 0.65
PTPN3P26045 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN3P26045 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN3P26045 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN3P26045 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN3P26045 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.14■□□□□ 0.65
PTPN3P26045 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN3P26045 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN3P26045 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN3P26045 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN3P26045 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN3P26045 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PTPN3P26045 AL499627.1-201ENST00000569373 2188 ntBASIC19.13■□□□□ 0.65
PTPN3P26045 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PTPN3P26045 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms