Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
TNFRSF1BP20333 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 AL355802.2-201ENST00000402069 882 ntBASIC17.47■□□□□ 0.39
TNFRSF1BP20333 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 ABALON-201ENST00000629058 1903 ntBASIC17.47■□□□□ 0.39
TNFRSF1BP20333 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFRSF1BP20333 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 HEIH-201ENST00000623091 1652 ntBASIC17.46■□□□□ 0.39
TNFRSF1BP20333 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 AC073592.3-201ENST00000625118 1834 ntBASIC17.46■□□□□ 0.39
TNFRSF1BP20333 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFRSF1BP20333 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
TNFRSF1BP20333 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TNFRSF1BP20333 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.46■□□□□ 0.38
TNFRSF1BP20333 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 RCC2P6-201ENST00000526625 1557 ntBASIC17.45■□□□□ 0.38
TNFRSF1BP20333 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 MTDHP1-201ENST00000605323 784 ntBASIC17.45■□□□□ 0.38
TNFRSF1BP20333 AC004264.1-201ENST00000608354 794 ntBASIC17.45■□□□□ 0.38
TNFRSF1BP20333 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 LTB4R2-202ENST00000528054 3092 ntBASIC17.45■□□□□ 0.38
TNFRSF1BP20333 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFRSF1BP20333 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TNFRSF1BP20333 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms