Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DOBP13765 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DOBP13765 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HLA-DOBP13765 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DOBP13765 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DOBP13765 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DOBP13765 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.85■□□□□ 0.29
HLA-DOBP13765 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
HLA-DOBP13765 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HLA-DOBP13765 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.84■□□□□ 0.29
HLA-DOBP13765 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.84■□□□□ 0.29
HLA-DOBP13765 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 HEIH-201ENST00000623091 1652 ntBASIC16.84■□□□□ 0.29
HLA-DOBP13765 ANO7L1-203ENST00000602586 1720 ntBASIC16.84■□□□□ 0.29
HLA-DOBP13765 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.84■□□□□ 0.29
HLA-DOBP13765 WIZP1-201ENST00000531444 2299 ntBASIC16.84■□□□□ 0.29
HLA-DOBP13765 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HLA-DOBP13765 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DOBP13765 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DOBP13765 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.83■□□□□ 0.29
HLA-DOBP13765 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HLA-DOBP13765 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOBP13765 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOBP13765 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DOBP13765 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOBP13765 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOBP13765 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DOBP13765 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOBP13765 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DOBP13765 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOBP13765 CRYGFP-201ENST00000418459 633 ntBASIC16.83■□□□□ 0.28
HLA-DOBP13765 RBM17P1-201ENST00000453646 1190 ntBASIC16.83■□□□□ 0.28
HLA-DOBP13765 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HLA-DOBP13765 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.83■□□□□ 0.28
HLA-DOBP13765 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOBP13765 KRT8P32-201ENST00000512863 1461 ntBASIC16.83■□□□□ 0.28
HLA-DOBP13765 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DOBP13765 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DOBP13765 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOBP13765 MIR4785-201ENST00000585005 73 ntBASIC16.83■□□□□ 0.28
HLA-DOBP13765 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DOBP13765 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOBP13765 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.28
HLA-DOBP13765 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HLA-DOBP13765 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOBP13765 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOBP13765 AC068587.9-201ENST00000641814 219 ntBASIC16.83■□□□□ 0.28
HLA-DOBP13765 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HLA-DOBP13765 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.83■□□□□ 0.28
HLA-DOBP13765 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.83■□□□□ 0.28
HLA-DOBP13765 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DOBP13765 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DOBP13765 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DOBP13765 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DOBP13765 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.82■□□□□ 0.28
HLA-DOBP13765 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DOBP13765 MTMR9LP-203ENST00000426597 1545 ntBASIC16.82■□□□□ 0.28
HLA-DOBP13765 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 AC079598.2-202ENST00000546624 1451 ntBASIC16.82■□□□□ 0.28
HLA-DOBP13765 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DOBP13765 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.82■□□□□ 0.28
HLA-DOBP13765 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DOBP13765 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms