Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HOXD8P13378 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD8P13378 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD8P13378 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXD8P13378 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXD8P13378 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD8P13378 KRT18P41-201ENST00000518924 1277 ntBASIC20.72■□□□□ 0.91
HOXD8P13378 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.72■□□□□ 0.91
HOXD8P13378 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXD8P13378 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.72■□□□□ 0.91
HOXD8P13378 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXD8P13378 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD8P13378 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD8P13378 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXD8P13378 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD8P13378 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD8P13378 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXD8P13378 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.72■□□□□ 0.91
HOXD8P13378 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HOXD8P13378 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXD8P13378 Z83836.1-201ENST00000624605 1642 ntBASIC20.71■□□□□ 0.91
HOXD8P13378 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXD8P13378 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
HOXD8P13378 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HOXD8P13378 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXD8P13378 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXD8P13378 PRELID1P1-202ENST00000567272 903 ntBASIC20.71■□□□□ 0.91
HOXD8P13378 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HOXD8P13378 AC005332.3-201ENST00000589904 676 ntBASIC20.71■□□□□ 0.91
HOXD8P13378 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.71■□□□□ 0.91
HOXD8P13378 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXD8P13378 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXD8P13378 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HOXD8P13378 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
HOXD8P13378 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HOXD8P13378 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXD8P13378 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXD8P13378 HEIH-201ENST00000623091 1652 ntBASIC20.7■□□□□ 0.91
HOXD8P13378 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXD8P13378 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXD8P13378 Z98044.1-201ENST00000632503 1764 ntBASIC20.7■□□□□ 0.9
HOXD8P13378 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXD8P13378 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXD8P13378 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXD8P13378 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXD8P13378 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.7■□□□□ 0.9
HOXD8P13378 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXD8P13378 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.7■□□□□ 0.9
HOXD8P13378 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXD8P13378 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.7■□□□□ 0.9
HOXD8P13378 KRT18P1-202ENST00000452408 1331 ntBASIC20.7■□□□□ 0.9
HOXD8P13378 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
HOXD8P13378 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HOXD8P13378 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXD8P13378 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HOXD8P13378 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXD8P13378 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXD8P13378 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.69■□□□□ 0.9
HOXD8P13378 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXD8P13378 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.69■□□□□ 0.9
HOXD8P13378 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.69■□□□□ 0.9
HOXD8P13378 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXD8P13378 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HOXD8P13378 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
HOXD8P13378 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.69■□□□□ 0.9
HOXD8P13378 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HOXD8P13378 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HOXD8P13378 AL032819.2-201ENST00000624543 2162 ntBASIC20.69■□□□□ 0.9
HOXD8P13378 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms