Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCL4P13236 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CCL4P13236 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 KRT8P7-201ENST00000533003 1432 ntBASIC17.73■□□□□ 0.43
CCL4P13236 HOXB1-202ENST00000577092 1414 ntBASIC17.73■□□□□ 0.43
CCL4P13236 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCL4P13236 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 IRX1P1-201ENST00000438849 1838 ntBASIC17.73■□□□□ 0.43
CCL4P13236 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL4P13236 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.73■□□□□ 0.43
CCL4P13236 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCL4P13236 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL4P13236 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 NUS1P1-201ENST00000446295 882 ntBASIC17.73■□□□□ 0.43
CCL4P13236 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.73■□□□□ 0.43
CCL4P13236 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.73■□□□□ 0.43
CCL4P13236 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.73■□□□□ 0.43
CCL4P13236 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCL4P13236 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 KRT8P32-201ENST00000512863 1461 ntBASIC17.73■□□□□ 0.43
CCL4P13236 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL4P13236 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCL4P13236 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCL4P13236 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.73■□□□□ 0.43
CCL4P13236 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCL4P13236 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCL4P13236 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.72■□□□□ 0.43
CCL4P13236 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL4P13236 Z83836.1-201ENST00000624605 1642 ntBASIC17.72■□□□□ 0.43
CCL4P13236 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL4P13236 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCL4P13236 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.72■□□□□ 0.43
CCL4P13236 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
CCL4P13236 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCL4P13236 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL4P13236 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL4P13236 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.72■□□□□ 0.43
CCL4P13236 AC004870.1-201ENST00000315132 882 ntBASIC17.72■□□□□ 0.43
CCL4P13236 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.72■□□□□ 0.43
CCL4P13236 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 LINC00265-3P-201ENST00000447588 903 ntBASIC17.72■□□□□ 0.43
CCL4P13236 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.72■□□□□ 0.43
CCL4P13236 AP000867.3-201ENST00000524675 377 ntBASIC17.72■□□□□ 0.43
CCL4P13236 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
CCL4P13236 TPSP2-201ENST00000561760 610 ntBASIC17.72■□□□□ 0.43
CCL4P13236 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.72■□□□□ 0.43
CCL4P13236 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.72■□□□□ 0.43
CCL4P13236 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCL4P13236 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.72■□□□□ 0.43
CCL4P13236 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.72■□□□□ 0.43
CCL4P13236 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL4P13236 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL4P13236 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.72■□□□□ 0.43
CCL4P13236 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL4P13236 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL4P13236 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.72■□□□□ 0.43
CCL4P13236 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.71■□□□□ 0.43
CCL4P13236 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL4P13236 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCL4P13236 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.71■□□□□ 0.43
CCL4P13236 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL4P13236 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL4P13236 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCL4P13236 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.71■□□□□ 0.43
CCL4P13236 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL4P13236 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL4P13236 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL4P13236 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.71■□□□□ 0.43
CCL4P13236 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCL4P13236 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.71■□□□□ 0.43
CCL4P13236 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.71■□□□□ 0.43
CCL4P13236 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.71■□□□□ 0.43
CCL4P13236 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL4P13236 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL4P13236 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL4P13236 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCL4P13236 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CCL4P13236 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.71■□□□□ 0.43
CCL4P13236 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms