Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC1P07992 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
ERCC1P07992 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC1P07992 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.68■□□□□ 0.26
ERCC1P07992 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ERCC1P07992 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.68■□□□□ 0.26
ERCC1P07992 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.67■□□□□ 0.26
ERCC1P07992 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
ERCC1P07992 AC079598.2-202ENST00000546624 1451 ntBASIC16.67■□□□□ 0.26
ERCC1P07992 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC1P07992 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC1P07992 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ERCC1P07992 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC1P07992 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC1P07992 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.67■□□□□ 0.26
ERCC1P07992 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.67■□□□□ 0.26
ERCC1P07992 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ERCC1P07992 AL031985.4-201ENST00000642138 673 ntBASIC16.67■□□□□ 0.26
ERCC1P07992 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ERCC1P07992 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 AC007613.1-201ENST00000572811 2597 ntBASIC16.67■□□□□ 0.26
ERCC1P07992 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ERCC1P07992 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC1P07992 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC1P07992 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ERCC1P07992 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.66■□□□□ 0.26
ERCC1P07992 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 UNC93B2-201ENST00000285383 730 ntBASIC16.66■□□□□ 0.26
ERCC1P07992 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ERCC1P07992 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ERCC1P07992 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.66■□□□□ 0.26
ERCC1P07992 NUDT16P1-203ENST00000513809 620 ntBASIC16.66■□□□□ 0.26
ERCC1P07992 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC1P07992 C1QL1P1-201ENST00000568105 661 ntBASIC16.66■□□□□ 0.26
ERCC1P07992 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ERCC1P07992 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC1P07992 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ERCC1P07992 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.66■□□□□ 0.26
ERCC1P07992 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ERCC1P07992 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC1P07992 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ERCC1P07992 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ERCC1P07992 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC1P07992 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.66■□□□□ 0.26
ERCC1P07992 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ERCC1P07992 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC1P07992 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC1P07992 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC1P07992 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC1P07992 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC1P07992 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC1P07992 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
ERCC1P07992 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC1P07992 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC1P07992 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC1P07992 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC1P07992 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ERCC1P07992 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
ERCC1P07992 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC1P07992 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC1P07992 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC1P07992 KRT18P16-201ENST00000510337 1294 ntBASIC16.65■□□□□ 0.26
ERCC1P07992 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.65■□□□□ 0.26
ERCC1P07992 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ERCC1P07992 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.65■□□□□ 0.26
ERCC1P07992 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.65■□□□□ 0.26
ERCC1P07992 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.65■□□□□ 0.26
ERCC1P07992 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC1P07992 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ERCC1P07992 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms