Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RETP07949 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RETP07949 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RETP07949 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.93■□□□□ 0.62
RETP07949 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RETP07949 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.92■□□□□ 0.62
RETP07949 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.92■□□□□ 0.62
RETP07949 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.92■□□□□ 0.62
RETP07949 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.92■□□□□ 0.62
RETP07949 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 AL691432.2-201ENST00000607222 2038 ntBASIC18.92■□□□□ 0.62
RETP07949 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RETP07949 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.92■□□□□ 0.62
RETP07949 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RETP07949 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.92■□□□□ 0.62
RETP07949 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
RETP07949 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.92■□□□□ 0.62
RETP07949 AL732292.2-201ENST00000609649 430 ntBASIC18.92■□□□□ 0.62
RETP07949 AC117500.6-201ENST00000624871 588 ntBASIC18.92■□□□□ 0.62
RETP07949 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.92■□□□□ 0.62
RETP07949 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.92■□□□□ 0.62
RETP07949 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.92■□□□□ 0.62
RETP07949 KRT18P1-202ENST00000452408 1331 ntBASIC18.92■□□□□ 0.62
RETP07949 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.92■□□□□ 0.62
RETP07949 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.92■□□□□ 0.62
RETP07949 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RETP07949 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RETP07949 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RETP07949 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RETP07949 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RETP07949 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.91■□□□□ 0.62
RETP07949 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RETP07949 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
RETP07949 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.91■□□□□ 0.62
RETP07949 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RETP07949 CHCHD2P8-201ENST00000429873 447 ntBASIC18.91■□□□□ 0.62
RETP07949 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.91■□□□□ 0.62
RETP07949 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.91■□□□□ 0.62
RETP07949 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.91■□□□□ 0.62
RETP07949 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.91■□□□□ 0.62
RETP07949 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.91■□□□□ 0.62
RETP07949 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.91■□□□□ 0.62
RETP07949 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RETP07949 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.91■□□□□ 0.62
RETP07949 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.91■□□□□ 0.62
RETP07949 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.91■□□□□ 0.62
RETP07949 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RETP07949 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RETP07949 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RETP07949 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RETP07949 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.91■□□□□ 0.62
RETP07949 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.9■□□□□ 0.62
RETP07949 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RETP07949 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.9■□□□□ 0.62
RETP07949 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.9■□□□□ 0.62
RETP07949 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.9■□□□□ 0.62
RETP07949 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.9■□□□□ 0.62
RETP07949 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.9■□□□□ 0.62
RETP07949 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.9■□□□□ 0.62
RETP07949 AC079781.3-201ENST00000449110 356 ntBASIC18.9■□□□□ 0.62
RETP07949 AC079776.4-201ENST00000511039 504 ntBASIC18.9■□□□□ 0.62
RETP07949 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.9■□□□□ 0.62
RETP07949 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
RETP07949 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.9■□□□□ 0.62
RETP07949 AC139530.3-201ENST00000620344 690 ntBASIC18.9■□□□□ 0.62
RETP07949 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.9■□□□□ 0.62
RETP07949 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.9■□□□□ 0.62
RETP07949 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.9■□□□□ 0.62
RETP07949 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.9■□□□□ 0.62
RETP07949 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RETP07949 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms