Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXA2O43364 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXA2O43364 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HOXA2O43364 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HOXA2O43364 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXA2O43364 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXA2O43364 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HOXA2O43364 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.09■□□□□ 0.81
HOXA2O43364 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXA2O43364 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXA2O43364 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.09■□□□□ 0.81
HOXA2O43364 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HOXA2O43364 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.09■□□□□ 0.81
HOXA2O43364 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXA2O43364 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HOXA2O43364 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.09■□□□□ 0.81
HOXA2O43364 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
HOXA2O43364 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HOXA2O43364 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HOXA2O43364 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
HOXA2O43364 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
HOXA2O43364 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
HOXA2O43364 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
HOXA2O43364 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HOXA2O43364 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HOXA2O43364 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HOXA2O43364 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.08■□□□□ 0.81
HOXA2O43364 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.08■□□□□ 0.81
HOXA2O43364 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.08■□□□□ 0.81
HOXA2O43364 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.08■□□□□ 0.81
HOXA2O43364 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.08■□□□□ 0.81
HOXA2O43364 TPSP2-201ENST00000561760 610 ntBASIC20.08■□□□□ 0.81
HOXA2O43364 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.08■□□□□ 0.81
HOXA2O43364 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.08■□□□□ 0.81
HOXA2O43364 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.08■□□□□ 0.8
HOXA2O43364 Z83836.1-201ENST00000624605 1642 ntBASIC20.08■□□□□ 0.8
HOXA2O43364 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
HOXA2O43364 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HOXA2O43364 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
HOXA2O43364 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
HOXA2O43364 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA2O43364 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HOXA2O43364 AC006333.2-201ENST00000607957 2099 ntBASIC20.07■□□□□ 0.8
HOXA2O43364 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA2O43364 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.07■□□□□ 0.8
HOXA2O43364 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXA2O43364 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HOXA2O43364 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
HOXA2O43364 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HOXA2O43364 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA2O43364 AC141586.3-201ENST00000562166 1838 ntBASIC20.07■□□□□ 0.8
HOXA2O43364 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXA2O43364 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA2O43364 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA2O43364 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA2O43364 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA2O43364 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.07■□□□□ 0.8
HOXA2O43364 LINC00265-3P-201ENST00000447588 903 ntBASIC20.07■□□□□ 0.8
HOXA2O43364 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.07■□□□□ 0.8
HOXA2O43364 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXA2O43364 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.07■□□□□ 0.8
HOXA2O43364 AC012615.1-201ENST00000565797 1299 ntBASIC20.07■□□□□ 0.8
HOXA2O43364 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.07■□□□□ 0.8
HOXA2O43364 AC005332.3-201ENST00000589904 676 ntBASIC20.07■□□□□ 0.8
HOXA2O43364 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.07■□□□□ 0.8
HOXA2O43364 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXA2O43364 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
HOXA2O43364 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA2O43364 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA2O43364 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXA2O43364 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA2O43364 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA2O43364 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXA2O43364 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA2O43364 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HOXA2O43364 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.06■□□□□ 0.8
HOXA2O43364 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HOXA2O43364 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.06■□□□□ 0.8
HOXA2O43364 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.06■□□□□ 0.8
HOXA2O43364 AP000867.3-201ENST00000524675 377 ntBASIC20.06■□□□□ 0.8
HOXA2O43364 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA2O43364 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXA2O43364 LINC01711-201ENST00000598340 967 ntBASIC20.06■□□□□ 0.8
HOXA2O43364 AL121772.3-201ENST00000610840 674 ntBASIC20.06■□□□□ 0.8
HOXA2O43364 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA2O43364 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
HOXA2O43364 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA2O43364 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA2O43364 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXA2O43364 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.06■□□□□ 0.8
HOXA2O43364 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA2O43364 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.05■□□□□ 0.8
HOXA2O43364 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.05■□□□□ 0.8
HOXA2O43364 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXA2O43364 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA2O43364 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXA2O43364 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms