Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.39■□□□□ 0.53
TAF4O00268 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.39■□□□□ 0.53
TAF4O00268 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TAF4O00268 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.39■□□□□ 0.53
TAF4O00268 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.39■□□□□ 0.53
TAF4O00268 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TAF4O00268 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.39■□□□□ 0.53
TAF4O00268 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TAF4O00268 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
TAF4O00268 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TAF4O00268 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TAF4O00268 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.38■□□□□ 0.53
TAF4O00268 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TAF4O00268 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.38■□□□□ 0.53
TAF4O00268 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.38■□□□□ 0.53
TAF4O00268 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TAF4O00268 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TAF4O00268 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TAF4O00268 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TAF4O00268 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TAF4O00268 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TAF4O00268 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TAF4O00268 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TAF4O00268 SPDYE13P-201ENST00000445314 798 ntBASIC18.38■□□□□ 0.53
TAF4O00268 EMBP1-201ENST00000458200 901 ntBASIC18.38■□□□□ 0.53
TAF4O00268 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.38■□□□□ 0.53
TAF4O00268 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TAF4O00268 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.38■□□□□ 0.53
TAF4O00268 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.38■□□□□ 0.53
TAF4O00268 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.38■□□□□ 0.53
TAF4O00268 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TAF4O00268 AL031008.1-201ENST00000619963 541 ntBASIC18.38■□□□□ 0.53
TAF4O00268 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TAF4O00268 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TAF4O00268 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TAF4O00268 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TAF4O00268 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.38■□□□□ 0.53
TAF4O00268 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TAF4O00268 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TAF4O00268 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TAF4O00268 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.37■□□□□ 0.53
TAF4O00268 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.37■□□□□ 0.53
TAF4O00268 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.37■□□□□ 0.53
TAF4O00268 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.37■□□□□ 0.53
TAF4O00268 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TAF4O00268 AL671883.3-201ENST00000603274 991 ntBASIC18.37■□□□□ 0.53
TAF4O00268 MIR2861-201ENST00000636310 90 ntBASIC18.37■□□□□ 0.53
TAF4O00268 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TAF4O00268 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.37■□□□□ 0.53
TAF4O00268 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TAF4O00268 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 AC011484.1-201ENST00000377652 1995 ntBASIC18.37■□□□□ 0.53
TAF4O00268 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.37■□□□□ 0.53
TAF4O00268 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TAF4O00268 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TAF4O00268 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
TAF4O00268 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.36■□□□□ 0.53
TAF4O00268 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.36■□□□□ 0.53
TAF4O00268 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
TAF4O00268 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TAF4O00268 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 AC007225.1-201ENST00000566331 1836 ntBASIC18.36■□□□□ 0.53
TAF4O00268 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TAF4O00268 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.36■□□□□ 0.53
TAF4O00268 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.36■□□□□ 0.53
TAF4O00268 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
TAF4O00268 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.36■□□□□ 0.53
TAF4O00268 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.36■□□□□ 0.53
TAF4O00268 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TAF4O00268 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TAF4O00268 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TAF4O00268 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TAF4O00268 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TAF4O00268 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms