Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.12■□□□□ 0.33
NPIPA2E9PIF3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 AC090340.1-201ENST00000620778 4980 ntBASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPA2E9PIF3 AC020763.4-201ENST00000623414 4170 ntBASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 TSPY21P-201ENST00000433481 731 ntBASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 AL441883.1-201ENST00000566170 1045 ntBASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 AL358472.4-201ENST00000633140 710 ntBASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 TEX21P-204ENST00000641479 1693 ntBASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 AC141586.3-201ENST00000562166 1838 ntBASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPA2E9PIF3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 AL031133.1-201ENST00000406807 723 ntBASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 TSPY23P-201ENST00000440136 739 ntBASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 HOMER2P1-201ENST00000455653 964 ntBASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 AL359075.1-203ENST00000462729 1002 ntBASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPA2E9PIF3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms