Protein–RNA interactions for Protein: A7XYQ1

SOBP, Sine oculis-binding protein homolog, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOBPA7XYQ1 AC125437.2-201ENST00000625180 2167 ntBASIC19.43■□□□□ 0.7
SOBPA7XYQ1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 KRT18P23-201ENST00000435622 1283 ntBASIC19.43■□□□□ 0.7
SOBPA7XYQ1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 NPAP1P7-201ENST00000613027 823 ntBASIC19.43■□□□□ 0.7
SOBPA7XYQ1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 AC093525.10-201ENST00000625130 1569 ntBASIC19.43■□□□□ 0.7
SOBPA7XYQ1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOBPA7XYQ1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 AL136038.4-201ENST00000603606 1261 ntBASIC19.42■□□□□ 0.7
SOBPA7XYQ1 AL121672.3-201ENST00000608644 468 ntBASIC19.42■□□□□ 0.7
SOBPA7XYQ1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 AL157888.1-201ENST00000631930 593 ntBASIC19.42■□□□□ 0.7
SOBPA7XYQ1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 AC034236.2-201ENST00000606662 1610 ntBASIC19.42■□□□□ 0.7
SOBPA7XYQ1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 AC008556.1-201ENST00000610908 2040 ntBASIC19.42■□□□□ 0.7
SOBPA7XYQ1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOBPA7XYQ1 IRX1P1-201ENST00000438849 1838 ntBASIC19.41■□□□□ 0.7
SOBPA7XYQ1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 AL391807.1-203ENST00000604392 2365 ntBASIC19.41■□□□□ 0.7
SOBPA7XYQ1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 AC010240.3-201ENST00000607688 395 ntBASIC19.41■□□□□ 0.7
SOBPA7XYQ1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 AC079602.3-201ENST00000623931 403 ntBASIC19.41■□□□□ 0.7
SOBPA7XYQ1 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOBPA7XYQ1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SOBPA7XYQ1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOBPA7XYQ1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOBPA7XYQ1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOBPA7XYQ1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.4■□□□□ 0.7
SOBPA7XYQ1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SOBPA7XYQ1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOBPA7XYQ1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SOBPA7XYQ1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SOBPA7XYQ1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.4■□□□□ 0.7
SOBPA7XYQ1 BX276092.5-203ENST00000456199 560 ntBASIC19.4■□□□□ 0.7
SOBPA7XYQ1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOBPA7XYQ1 KRT8P26-201ENST00000534154 1276 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms