Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 AC073130.3-201ENST00000624389 2278 ntBASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 KRT18P23-201ENST00000435622 1283 ntBASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 SEC1P-202ENST00000473944 940 ntBASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRGV5A0A0B4J1U4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 AC007952.6-201ENST00000573168 2673 ntBASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 AC003957.1-201ENST00000625108 2673 ntBASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 AC116407.4-201ENST00000623319 1061 ntBASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 KRT8P7-201ENST00000533003 1432 ntBASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRGV5A0A0B4J1U4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 HBZP1-201ENST00000354915 429 ntBASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 MIR564-202ENST00000385049 94 ntBASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TRGV5A0A0B4J1U4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TRGV5A0A0B4J1U4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRGV5A0A0B4J1U4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRGV5A0A0B4J1U4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRGV5A0A0B4J1U4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.83■□□□□ 0.28
TRGV5A0A0B4J1U4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRGV5A0A0B4J1U4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRGV5A0A0B4J1U4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRGV5A0A0B4J1U4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.83■□□□□ 0.28
TRGV5A0A0B4J1U4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRGV5A0A0B4J1U4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.83■□□□□ 0.28
TRGV5A0A0B4J1U4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms