Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MIR656-201ENST00000385224 78 ntBASIC-3.25□□□□□ -2.93
TRIM4Q9C037 SNORD115.2-201ENST00000391126 59 ntBASIC-3.25□□□□□ -2.93
TRIM4Q9C037 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.25□□□□□ -2.93
TRIM4Q9C037 RNU6-92P-201ENST00000605893 104 ntBASIC-3.25□□□□□ -2.93
TRIM4Q9C037 SNORD60.1-201ENST00000362451 73 ntBASIC-3.26□□□□□ -2.93
TRIM4Q9C037 SNORA63.4-201ENST00000362763 126 ntBASIC-3.26□□□□□ -2.93
TRIM4Q9C037 MIR569-201ENST00000385228 96 ntBASIC-3.26□□□□□ -2.93
TRIM4Q9C037 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.26□□□□□ -2.93
TRIM4Q9C037 MIR548S-201ENST00000581352 82 ntBASIC-3.26□□□□□ -2.93
TRIM4Q9C037 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.27□□□□□ -2.93
TRIM4Q9C037 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.27□□□□□ -2.93
TRIM4Q9C037 SNORA40.16-201ENST00000517238 121 ntBASIC-3.27□□□□□ -2.93
TRIM4Q9C037 Y_RNA.218-201ENST00000364218 104 ntBASIC-3.28□□□□□ -2.93
TRIM4Q9C037 SNORD45C-201ENST00000383893 79 ntBASIC-3.28□□□□□ -2.93
TRIM4Q9C037 RNU6-196P-201ENST00000384315 107 ntBASIC-3.28□□□□□ -2.93
TRIM4Q9C037 MTATP8P2-201ENST00000435212 202 ntBASIC-3.28□□□□□ -2.93
TRIM4Q9C037 RNU6-557P-201ENST00000516842 110 ntBASIC-3.28□□□□□ -2.93
TRIM4Q9C037 U7.3-201ENST00000616123 62 ntBASIC-3.28□□□□□ -2.93
TRIM4Q9C037 Y_RNA.260-201ENST00000364628 101 ntBASIC-3.29□□□□□ -2.94
TRIM4Q9C037 SNORA20.1-201ENST00000364790 130 ntBASIC-3.29□□□□□ -2.94
TRIM4Q9C037 RNU6-686P-201ENST00000364839 107 ntBASIC-3.29□□□□□ -2.94
TRIM4Q9C037 RNU6-402P-201ENST00000410678 103 ntBASIC-3.29□□□□□ -2.94
TRIM4Q9C037 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.3□□□□□ -2.94
TRIM4Q9C037 Y_RNA.107-201ENST00000363190 121 ntBASIC-3.31□□□□□ -2.94
TRIM4Q9C037 Y_RNA.206-201ENST00000364136 102 ntBASIC-3.32□□□□□ -2.94
TRIM4Q9C037 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.32□□□□□ -2.94
TRIM4Q9C037 AC093729.1-201ENST00000513074 128 ntBASIC-3.32□□□□□ -2.94
TRIM4Q9C037 SNORD33.1-201ENST00000516213 88 ntBASIC-3.32□□□□□ -2.94
TRIM4Q9C037 RNU6-633P-201ENST00000362612 103 ntBASIC-3.33□□□□□ -2.94
TRIM4Q9C037 RNA5SP224-201ENST00000365069 126 ntBASIC-3.33□□□□□ -2.94
TRIM4Q9C037 SNORD116-24-201ENST00000384549 92 ntBASIC-3.33□□□□□ -2.94
TRIM4Q9C037 MIR3914-2-201ENST00000637339 95 ntBASIC-3.33□□□□□ -2.94
TRIM4Q9C037 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.34□□□□□ -2.94
TRIM4Q9C037 RNU6-1107P-201ENST00000364817 104 ntBASIC-3.34□□□□□ -2.94
TRIM4Q9C037 RNU7-120P-201ENST00000459334 63 ntBASIC-3.34□□□□□ -2.94
TRIM4Q9C037 MIR548AI-201ENST00000579940 88 ntBASIC-3.34□□□□□ -2.94
TRIM4Q9C037 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.35□□□□□ -2.95
TRIM4Q9C037 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.35□□□□□ -2.95
TRIM4Q9C037 MTCYBP6-201ENST00000441810 138 ntBASIC-3.35□□□□□ -2.95
TRIM4Q9C037 AL117187.1-201ENST00000555482 181 ntBASIC-3.35□□□□□ -2.95
TRIM4Q9C037 RNU6-659P-201ENST00000516454 104 ntBASIC-3.36□□□□□ -2.95
TRIM4Q9C037 U6.95-201ENST00000636931 70 ntBASIC-3.36□□□□□ -2.95
TRIM4Q9C037 Y_RNA.93-201ENST00000363066 109 ntBASIC-3.37□□□□□ -2.95
TRIM4Q9C037 RNU6-895P-201ENST00000384125 103 ntBASIC-3.37□□□□□ -2.95
TRIM4Q9C037 RNU6-422P-201ENST00000384632 107 ntBASIC-3.37□□□□□ -2.95
TRIM4Q9C037 MIR590-201ENST00000385008 97 ntBASIC-3.37□□□□□ -2.95
TRIM4Q9C037 MTND4LP9-201ENST00000427694 174 ntBASIC-3.37□□□□□ -2.95
TRIM4Q9C037 RNU7-107P-201ENST00000459121 61 ntBASIC-3.37□□□□□ -2.95
TRIM4Q9C037 MIR1297-201ENST00000637311 77 ntBASIC-3.37□□□□□ -2.95
TRIM4Q9C037 Y_RNA.535-201ENST00000384612 99 ntBASIC-3.38□□□□□ -2.95
TRIM4Q9C037 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.38□□□□□ -2.95
TRIM4Q9C037 RNU6-394P-201ENST00000410735 107 ntBASIC-3.38□□□□□ -2.95
TRIM4Q9C037 RNU6-836P-201ENST00000362920 107 ntBASIC-3.39□□□□□ -2.95
TRIM4Q9C037 RNU6-788P-201ENST00000390967 104 ntBASIC-3.39□□□□□ -2.95
TRIM4Q9C037 RNU6-542P-201ENST00000516405 103 ntBASIC-3.39□□□□□ -2.95
TRIM4Q9C037 RNU6-426P-201ENST00000516464 97 ntBASIC-3.4□□□□□ -2.95
TRIM4Q9C037 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.4□□□□□ -2.95
TRIM4Q9C037 MIR4668-201ENST00000582284 70 ntBASIC-3.4□□□□□ -2.95
TRIM4Q9C037 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.41□□□□□ -2.96
TRIM4Q9C037 AC062037.2-201ENST00000610137 73 ntBASIC-3.41□□□□□ -2.96
TRIM4Q9C037 Y_RNA.422-201ENST00000384054 114 ntBASIC-3.42□□□□□ -2.96
TRIM4Q9C037 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.42□□□□□ -2.96
TRIM4Q9C037 Y_RNA.335-201ENST00000365299 96 ntBASIC-3.43□□□□□ -2.96
TRIM4Q9C037 MIR1302-5-201ENST00000408164 150 ntBASIC-3.43□□□□□ -2.96
TRIM4Q9C037 RNU6-109P-201ENST00000516364 107 ntBASIC-3.43□□□□□ -2.96
TRIM4Q9C037 RNU6-184P-201ENST00000516514 107 ntBASIC-3.43□□□□□ -2.96
TRIM4Q9C037 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.43□□□□□ -2.96
TRIM4Q9C037 RNY4P13-201ENST00000384284 96 ntBASIC-3.44□□□□□ -2.96
TRIM4Q9C037 MIR154-201ENST00000385243 84 ntBASIC-3.44□□□□□ -2.96
TRIM4Q9C037 SNORA40-201ENST00000388090 126 ntBASIC-3.44□□□□□ -2.96
TRIM4Q9C037 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-3.44□□□□□ -2.96
TRIM4Q9C037 RNU7-119P-201ENST00000459279 63 ntBASIC-3.45□□□□□ -2.96
TRIM4Q9C037 SCARNA15.1-201ENST00000516384 125 ntBASIC-3.45□□□□□ -2.96
TRIM4Q9C037 RNU6-419P-201ENST00000517030 63 ntBASIC-3.45□□□□□ -2.96
TRIM4Q9C037 Y_RNA.290-201ENST00000364879 114 ntBASIC-3.46□□□□□ -2.96
TRIM4Q9C037 RNU6-804P-201ENST00000384286 107 ntBASIC-3.46□□□□□ -2.96
TRIM4Q9C037 RNU6-380P-201ENST00000410207 107 ntBASIC-3.46□□□□□ -2.96
TRIM4Q9C037 MIR4317-201ENST00000637586 65 ntBASIC-3.46□□□□□ -2.96
TRIM4Q9C037 RNA5SP449-201ENST00000516871 130 ntBASIC-3.47□□□□□ -2.96
TRIM4Q9C037 AC044792.1-201ENST00000593294 196 ntBASIC-3.47□□□□□ -2.96
TRIM4Q9C037 MIR548BB-201ENST00000626714 66 ntBASIC-3.48□□□□□ -2.97
TRIM4Q9C037 SNORD116-21-201ENST00000384507 92 ntBASIC-3.49□□□□□ -2.97
TRIM4Q9C037 RNU6-1160P-201ENST00000384546 104 ntBASIC-3.49□□□□□ -2.97
TRIM4Q9C037 Y_RNA.544-201ENST00000384650 113 ntBASIC-3.49□□□□□ -2.97
TRIM4Q9C037 Y_RNA.620-201ENST00000411009 88 ntBASIC-3.49□□□□□ -2.97
TRIM4Q9C037 RNU6-267P-201ENST00000516714 103 ntBASIC-3.49□□□□□ -2.97
TRIM4Q9C037 MIR4801-201ENST00000582704 82 ntBASIC-3.49□□□□□ -2.97
TRIM4Q9C037 MIR1302-3-201ENST00000408128 138 ntBASIC-3.51□□□□□ -2.97
TRIM4Q9C037 MIR545-201ENST00000385085 106 ntBASIC-3.52□□□□□ -2.97
TRIM4Q9C037 Y_RNA.611-201ENST00000410682 108 ntBASIC-3.52□□□□□ -2.97
TRIM4Q9C037 RNU6-122P-201ENST00000516818 107 ntBASIC-3.52□□□□□ -2.97
TRIM4Q9C037 RNU6-70P-201ENST00000516438 60 ntBASIC-3.53□□□□□ -2.97
TRIM4Q9C037 AC008737.2-201ENST00000599446 118 ntBASIC-3.53□□□□□ -2.97
TRIM4Q9C037 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-3.53□□□□□ -2.97
TRIM4Q9C037 RNU6-1128P-201ENST00000362825 109 ntBASIC-3.55□□□□□ -2.98
TRIM4Q9C037 RNU6-257P-201ENST00000410238 98 ntBASIC-3.55□□□□□ -2.98
TRIM4Q9C037 SNORA25.5-201ENST00000363782 126 ntBASIC-3.56□□□□□ -2.98
TRIM4Q9C037 RNU6-776P-201ENST00000364403 104 ntBASIC-3.56□□□□□ -2.98
TRIM4Q9C037 RNU6-219P-201ENST00000364728 107 ntBASIC-3.56□□□□□ -2.98
TRIM4Q9C037 RNU6-1022P-201ENST00000365049 104 ntBASIC-3.56□□□□□ -2.98
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms