Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR3914-2-201ENST00000637339 95 ntBASIC-2.32□□□□□ -2.78
VAPAQ9P0L0 MIR202-201ENST00000362219 110 ntBASIC-2.33□□□□□ -2.78
VAPAQ9P0L0 RNU6-668P-201ENST00000364180 107 ntBASIC-2.33□□□□□ -2.78
VAPAQ9P0L0 AC074348.1-201ENST00000426503 132 ntBASIC-2.33□□□□□ -2.78
VAPAQ9P0L0 MTND4LP1-201ENST00000446263 157 ntBASIC-2.33□□□□□ -2.78
VAPAQ9P0L0 AL117351.2-201ENST00000513571 157 ntBASIC-2.33□□□□□ -2.78
VAPAQ9P0L0 RNA5SP215-201ENST00000363440 122 ntBASIC-2.34□□□□□ -2.78
VAPAQ9P0L0 SNORD115-37-201ENST00000363768 82 ntBASIC-2.34□□□□□ -2.78
VAPAQ9P0L0 RNU6-694P-201ENST00000364071 147 ntBASIC-2.34□□□□□ -2.78
VAPAQ9P0L0 MTND5P41-201ENST00000517498 206 ntBASIC-2.34□□□□□ -2.78
VAPAQ9P0L0 RNU6-200P-201ENST00000364743 107 ntBASIC-2.35□□□□□ -2.79
VAPAQ9P0L0 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.35□□□□□ -2.79
VAPAQ9P0L0 RNU6-649P-201ENST00000384463 107 ntBASIC-2.35□□□□□ -2.79
VAPAQ9P0L0 RNU6-141P-201ENST00000410499 105 ntBASIC-2.35□□□□□ -2.79
VAPAQ9P0L0 RNU6-633P-201ENST00000362612 103 ntBASIC-2.36□□□□□ -2.79
VAPAQ9P0L0 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.36□□□□□ -2.79
VAPAQ9P0L0 SNORD113.1-201ENST00000363280 73 ntBASIC-2.36□□□□□ -2.79
VAPAQ9P0L0 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.36□□□□□ -2.79
VAPAQ9P0L0 SNORD113-3-201ENST00000364830 72 ntBASIC-2.36□□□□□ -2.79
VAPAQ9P0L0 Y_RNA.349-201ENST00000365406 102 ntBASIC-2.36□□□□□ -2.79
VAPAQ9P0L0 SNORD45A-201ENST00000384512 84 ntBASIC-2.36□□□□□ -2.79
VAPAQ9P0L0 RNU6-520P-201ENST00000384717 104 ntBASIC-2.36□□□□□ -2.79
VAPAQ9P0L0 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.36□□□□□ -2.79
VAPAQ9P0L0 AC093729.1-201ENST00000513074 128 ntBASIC-2.36□□□□□ -2.79
VAPAQ9P0L0 RNU6-182P-201ENST00000516970 105 ntBASIC-2.36□□□□□ -2.79
VAPAQ9P0L0 MIR4503-201ENST00000582187 83 ntBASIC-2.36□□□□□ -2.79
VAPAQ9P0L0 RNY4P9-201ENST00000363194 97 ntBASIC-2.37□□□□□ -2.79
VAPAQ9P0L0 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.37□□□□□ -2.79
VAPAQ9P0L0 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.38□□□□□ -2.79
VAPAQ9P0L0 RNU6-971P-201ENST00000516920 106 ntBASIC-2.38□□□□□ -2.79
VAPAQ9P0L0 AC004792.1-201ENST00000614523 137 ntBASIC-2.38□□□□□ -2.79
VAPAQ9P0L0 AP001318.4-201ENST00000616637 121 ntBASIC-2.38□□□□□ -2.79
VAPAQ9P0L0 MIR664A-201ENST00000626086 82 ntBASIC-2.38□□□□□ -2.79
VAPAQ9P0L0 RNY1P1-201ENST00000364372 112 ntBASIC-2.39□□□□□ -2.79
VAPAQ9P0L0 RNU6-257P-201ENST00000410238 98 ntBASIC-2.39□□□□□ -2.79
VAPAQ9P0L0 MIR4668-201ENST00000582284 70 ntBASIC-2.39□□□□□ -2.79
VAPAQ9P0L0 RNU6-686P-201ENST00000364839 107 ntBASIC-2.4□□□□□ -2.79
VAPAQ9P0L0 RNU6-106P-201ENST00000384405 107 ntBASIC-2.4□□□□□ -2.79
VAPAQ9P0L0 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.4□□□□□ -2.79
VAPAQ9P0L0 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.41□□□□□ -2.8
VAPAQ9P0L0 SNORD60-201ENST00000383903 83 ntBASIC-2.41□□□□□ -2.8
VAPAQ9P0L0 RNU6-196P-201ENST00000384315 107 ntBASIC-2.41□□□□□ -2.8
VAPAQ9P0L0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.41□□□□□ -2.8
VAPAQ9P0L0 MIR548N-201ENST00000408742 75 ntBASIC-2.41□□□□□ -2.8
VAPAQ9P0L0 RNU6-557P-201ENST00000516842 110 ntBASIC-2.41□□□□□ -2.8
VAPAQ9P0L0 RNU6-912P-201ENST00000363800 104 ntBASIC-2.42□□□□□ -2.8
VAPAQ9P0L0 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.42□□□□□ -2.8
VAPAQ9P0L0 Y_RNA.513-201ENST00000384522 100 ntBASIC-2.42□□□□□ -2.8
VAPAQ9P0L0 SNORA19-201ENST00000384737 128 ntBASIC-2.42□□□□□ -2.8
VAPAQ9P0L0 SNORA40-201ENST00000388090 126 ntBASIC-2.42□□□□□ -2.8
VAPAQ9P0L0 MTATP8P2-201ENST00000435212 202 ntBASIC-2.42□□□□□ -2.8
VAPAQ9P0L0 RNU6-327P-201ENST00000516270 127 ntBASIC-2.42□□□□□ -2.8
VAPAQ9P0L0 RNU6-659P-201ENST00000516454 104 ntBASIC-2.42□□□□□ -2.8
VAPAQ9P0L0 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.42□□□□□ -2.8
VAPAQ9P0L0 Y_RNA.69-201ENST00000362885 109 ntBASIC-2.43□□□□□ -2.8
VAPAQ9P0L0 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.43□□□□□ -2.8
VAPAQ9P0L0 RNA5SP173-201ENST00000364857 136 ntBASIC-2.43□□□□□ -2.8
VAPAQ9P0L0 SNORD116-21-201ENST00000384507 92 ntBASIC-2.43□□□□□ -2.8
VAPAQ9P0L0 RNU6-267P-201ENST00000516714 103 ntBASIC-2.43□□□□□ -2.8
VAPAQ9P0L0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.43□□□□□ -2.8
VAPAQ9P0L0 U6.95-201ENST00000636931 70 ntBASIC-2.44□□□□□ -2.8
VAPAQ9P0L0 SNORA17.4-201ENST00000391287 132 ntBASIC-2.45□□□□□ -2.8
VAPAQ9P0L0 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.45□□□□□ -2.8
VAPAQ9P0L0 AP001094.1-201ENST00000579805 193 ntBASIC-2.45□□□□□ -2.8
VAPAQ9P0L0 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.45□□□□□ -2.8
VAPAQ9P0L0 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.45□□□□□ -2.8
VAPAQ9P0L0 RNU6-230P-201ENST00000362457 104 ntBASIC-2.46□□□□□ -2.8
VAPAQ9P0L0 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.46□□□□□ -2.8
VAPAQ9P0L0 MIR1302-5-201ENST00000408164 150 ntBASIC-2.46□□□□□ -2.8
VAPAQ9P0L0 RNU6-554P-201ENST00000410466 106 ntBASIC-2.47□□□□□ -2.8
VAPAQ9P0L0 MIR8053-201ENST00000613344 75 ntBASIC-2.47□□□□□ -2.8
VAPAQ9P0L0 MIR548BB-201ENST00000626714 66 ntBASIC-2.47□□□□□ -2.8
VAPAQ9P0L0 RNU6-810P-201ENST00000364001 107 ntBASIC-2.48□□□□□ -2.81
VAPAQ9P0L0 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.48□□□□□ -2.81
VAPAQ9P0L0 RNU6-530P-201ENST00000391180 107 ntBASIC-2.48□□□□□ -2.81
VAPAQ9P0L0 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.49□□□□□ -2.81
VAPAQ9P0L0 RNU6-219P-201ENST00000364728 107 ntBASIC-2.49□□□□□ -2.81
VAPAQ9P0L0 RNU6-129P-201ENST00000391022 107 ntBASIC-2.49□□□□□ -2.81
VAPAQ9P0L0 RNU6-402P-201ENST00000410678 103 ntBASIC-2.49□□□□□ -2.81
VAPAQ9P0L0 SNORD54-201ENST00000459159 67 ntBASIC-2.49□□□□□ -2.81
VAPAQ9P0L0 RNU6-68P-201ENST00000516576 104 ntBASIC-2.49□□□□□ -2.81
VAPAQ9P0L0 SNORA63.4-201ENST00000362763 126 ntBASIC-2.5□□□□□ -2.81
VAPAQ9P0L0 RNU6-828P-201ENST00000364876 107 ntBASIC-2.5□□□□□ -2.81
VAPAQ9P0L0 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.5□□□□□ -2.81
VAPAQ9P0L0 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.5□□□□□ -2.81
VAPAQ9P0L0 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.5□□□□□ -2.81
VAPAQ9P0L0 RNU6-379P-201ENST00000363813 104 ntBASIC-2.51□□□□□ -2.81
VAPAQ9P0L0 RNU6-497P-201ENST00000365316 104 ntBASIC-2.51□□□□□ -2.81
VAPAQ9P0L0 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.51□□□□□ -2.81
VAPAQ9P0L0 SNORD116-24-201ENST00000384549 92 ntBASIC-2.51□□□□□ -2.81
VAPAQ9P0L0 RNU6-907P-201ENST00000390924 102 ntBASIC-2.51□□□□□ -2.81
VAPAQ9P0L0 RNU6-789P-201ENST00000517105 102 ntBASIC-2.51□□□□□ -2.81
VAPAQ9P0L0 RNU6-361P-201ENST00000364454 107 ntBASIC-2.52□□□□□ -2.81
VAPAQ9P0L0 MIR1254-1-201ENST00000408257 97 ntBASIC-2.52□□□□□ -2.81
VAPAQ9P0L0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-2.52□□□□□ -2.81
VAPAQ9P0L0 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.52□□□□□ -2.81
VAPAQ9P0L0 RNU7-160P-201ENST00000516660 62 ntBASIC-2.52□□□□□ -2.81
VAPAQ9P0L0 RNU6-388P-201ENST00000517012 105 ntBASIC-2.52□□□□□ -2.81
VAPAQ9P0L0 RNU6-389P-201ENST00000517048 105 ntBASIC-2.52□□□□□ -2.81
VAPAQ9P0L0 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.52□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms