Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MIR1246-201ENST00000636535 73 ntBASIC-2.01□□□□□ -2.73
PTP4A1Q93096 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.02□□□□□ -2.73
PTP4A1Q93096 SNORD18.1-201ENST00000363807 70 ntBASIC-2.04□□□□□ -2.74
PTP4A1Q93096 RNU6-540P-201ENST00000384622 101 ntBASIC-2.04□□□□□ -2.74
PTP4A1Q93096 SNORA19-201ENST00000384737 128 ntBASIC-2.04□□□□□ -2.74
PTP4A1Q93096 RNU6-633P-201ENST00000362612 103 ntBASIC-2.05□□□□□ -2.74
PTP4A1Q93096 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.05□□□□□ -2.74
PTP4A1Q93096 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.06□□□□□ -2.74
PTP4A1Q93096 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.06□□□□□ -2.74
PTP4A1Q93096 RNU6-246P-201ENST00000384702 107 ntBASIC-2.06□□□□□ -2.74
PTP4A1Q93096 AC018880.2-201ENST00000414265 201 ntBASIC-2.06□□□□□ -2.74
PTP4A1Q93096 RNU6-983P-201ENST00000516004 103 ntBASIC-2.06□□□□□ -2.74
PTP4A1Q93096 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.06□□□□□ -2.74
PTP4A1Q93096 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.07□□□□□ -2.74
PTP4A1Q93096 RPL35AP4-201ENST00000412007 102 ntBASIC-2.07□□□□□ -2.74
PTP4A1Q93096 RNU6-656P-201ENST00000516785 107 ntBASIC-2.07□□□□□ -2.74
PTP4A1Q93096 MIR3668-201ENST00000582138 75 ntBASIC-2.07□□□□□ -2.74
PTP4A1Q93096 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.08□□□□□ -2.74
PTP4A1Q93096 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.08□□□□□ -2.74
PTP4A1Q93096 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.08□□□□□ -2.74
PTP4A1Q93096 MIR1468-201ENST00000410600 86 ntBASIC-2.08□□□□□ -2.74
PTP4A1Q93096 AC093729.1-201ENST00000513074 128 ntBASIC-2.08□□□□□ -2.74
PTP4A1Q93096 RNU6-589P-201ENST00000516485 107 ntBASIC-2.08□□□□□ -2.74
PTP4A1Q93096 U7.5-201ENST00000517224 61 ntBASIC-2.08□□□□□ -2.74
PTP4A1Q93096 MIR4668-201ENST00000582284 70 ntBASIC-2.08□□□□□ -2.74
PTP4A1Q93096 RNU6-81P-201ENST00000365608 104 ntBASIC-2.09□□□□□ -2.74
PTP4A1Q93096 MIR548C-201ENST00000384815 97 ntBASIC-2.09□□□□□ -2.74
PTP4A1Q93096 AL031737.1-201ENST00000450125 223 ntBASIC-2.1□□□□□ -2.75
PTP4A1Q93096 MIR548AG1-201ENST00000579932 66 ntBASIC-2.1□□□□□ -2.75
PTP4A1Q93096 AL365222.1-201ENST00000614661 98 ntBASIC-2.1□□□□□ -2.75
PTP4A1Q93096 U2.7-201ENST00000619197 100 ntBASIC-2.1□□□□□ -2.75
PTP4A1Q93096 MIR487B-201ENST00000385021 84 ntBASIC-2.11□□□□□ -2.75
PTP4A1Q93096 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.11□□□□□ -2.75
PTP4A1Q93096 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.11□□□□□ -2.75
PTP4A1Q93096 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.12□□□□□ -2.75
PTP4A1Q93096 RNU6-645P-201ENST00000364649 106 ntBASIC-2.12□□□□□ -2.75
PTP4A1Q93096 SNORD116-22-201ENST00000384430 92 ntBASIC-2.12□□□□□ -2.75
PTP4A1Q93096 RNU7-88P-201ENST00000458752 63 ntBASIC-2.12□□□□□ -2.75
PTP4A1Q93096 RNU6-624P-201ENST00000363411 107 ntBASIC-2.13□□□□□ -2.75
PTP4A1Q93096 AC108019.1-201ENST00000512540 175 ntBASIC-2.13□□□□□ -2.75
PTP4A1Q93096 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.14□□□□□ -2.75
PTP4A1Q93096 MIR429-201ENST00000362106 83 ntBASIC-2.15□□□□□ -2.75
PTP4A1Q93096 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.15□□□□□ -2.75
PTP4A1Q93096 MIR3675-201ENST00000583661 73 ntBASIC-2.15□□□□□ -2.75
PTP4A1Q93096 RNU6-228P-201ENST00000362700 106 ntBASIC-2.16□□□□□ -2.76
PTP4A1Q93096 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.16□□□□□ -2.76
PTP4A1Q93096 RNU6-695P-201ENST00000391157 104 ntBASIC-2.16□□□□□ -2.76
PTP4A1Q93096 RNU6-303P-201ENST00000517091 106 ntBASIC-2.16□□□□□ -2.76
PTP4A1Q93096 MIR3671-201ENST00000580455 88 ntBASIC-2.16□□□□□ -2.76
PTP4A1Q93096 RNU6-1117P-201ENST00000384525 104 ntBASIC-2.17□□□□□ -2.76
PTP4A1Q93096 MIR1285-2-201ENST00000408311 88 ntBASIC-2.17□□□□□ -2.76
PTP4A1Q93096 RNU6-557P-201ENST00000516842 110 ntBASIC-2.17□□□□□ -2.76
PTP4A1Q93096 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.17□□□□□ -2.76
PTP4A1Q93096 RNU6-1168P-201ENST00000390831 104 ntBASIC-2.18□□□□□ -2.76
PTP4A1Q93096 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.18□□□□□ -2.76
PTP4A1Q93096 RNU6-478P-201ENST00000363904 110 ntBASIC-2.19□□□□□ -2.76
PTP4A1Q93096 RNU6-608P-201ENST00000383927 104 ntBASIC-2.19□□□□□ -2.76
PTP4A1Q93096 SNORA40.13-201ENST00000516379 120 ntBASIC-2.19□□□□□ -2.76
PTP4A1Q93096 MIR664B-201ENST00000626756 61 ntBASIC-2.19□□□□□ -2.76
PTP4A1Q93096 MIR365A-201ENST00000362260 87 ntBASIC-2.2□□□□□ -2.76
PTP4A1Q93096 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.2□□□□□ -2.76
PTP4A1Q93096 MIR23C-201ENST00000579846 100 ntBASIC-2.21□□□□□ -2.76
PTP4A1Q93096 RNU6-686P-201ENST00000364839 107 ntBASIC-2.22□□□□□ -2.76
PTP4A1Q93096 RNU6-841P-201ENST00000383872 107 ntBASIC-2.22□□□□□ -2.76
PTP4A1Q93096 RNU6-22P-201ENST00000384355 107 ntBASIC-2.22□□□□□ -2.76
PTP4A1Q93096 MIR548Q-201ENST00000408404 100 ntBASIC-2.22□□□□□ -2.76
PTP4A1Q93096 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.23□□□□□ -2.77
PTP4A1Q93096 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.23□□□□□ -2.77
PTP4A1Q93096 SNORA8.1-201ENST00000384250 140 ntBASIC-2.23□□□□□ -2.77
PTP4A1Q93096 RNU6-380P-201ENST00000410207 107 ntBASIC-2.23□□□□□ -2.77
PTP4A1Q93096 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.23□□□□□ -2.77
PTP4A1Q93096 MIR4756-201ENST00000577874 78 ntBASIC-2.23□□□□□ -2.77
PTP4A1Q93096 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.23□□□□□ -2.77
PTP4A1Q93096 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.23□□□□□ -2.77
PTP4A1Q93096 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.24□□□□□ -2.77
PTP4A1Q93096 RNU6-1154P-201ENST00000391001 104 ntBASIC-2.24□□□□□ -2.77
PTP4A1Q93096 RNU6-313P-201ENST00000516317 112 ntBASIC-2.24□□□□□ -2.77
PTP4A1Q93096 MIR548M-201ENST00000408260 86 ntBASIC-2.25□□□□□ -2.77
PTP4A1Q93096 MIR4441-201ENST00000582623 100 ntBASIC-2.25□□□□□ -2.77
PTP4A1Q93096 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.26□□□□□ -2.77
PTP4A1Q93096 MIR3123-201ENST00000583417 75 ntBASIC-2.26□□□□□ -2.77
PTP4A1Q93096 MIR548AM-201ENST00000584298 74 ntBASIC-2.26□□□□□ -2.77
PTP4A1Q93096 MALAT1.1-201ENST00000618249 95 ntBASIC-2.26□□□□□ -2.77
PTP4A1Q93096 MIR450A1-201ENST00000362262 91 ntBASIC-2.27□□□□□ -2.77
PTP4A1Q93096 RNU6-458P-201ENST00000384179 107 ntBASIC-2.27□□□□□ -2.77
PTP4A1Q93096 RNU6-696P-201ENST00000390834 107 ntBASIC-2.27□□□□□ -2.77
PTP4A1Q93096 RNU6-630P-201ENST00000391258 106 ntBASIC-2.27□□□□□ -2.77
PTP4A1Q93096 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.27□□□□□ -2.77
PTP4A1Q93096 U6.58-201ENST00000613107 107 ntBASIC-2.27□□□□□ -2.77
PTP4A1Q93096 AP001318.4-201ENST00000616637 121 ntBASIC-2.27□□□□□ -2.77
PTP4A1Q93096 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.27□□□□□ -2.77
PTP4A1Q93096 MIR520D-201ENST00000385002 87 ntBASIC-2.28□□□□□ -2.77
PTP4A1Q93096 RNU7-174P-201ENST00000516248 59 ntBASIC-2.28□□□□□ -2.77
PTP4A1Q93096 MIR1297-201ENST00000637311 77 ntBASIC-2.28□□□□□ -2.77
PTP4A1Q93096 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.29□□□□□ -2.78
PTP4A1Q93096 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.29□□□□□ -2.78
PTP4A1Q93096 MIR548BB-201ENST00000626714 66 ntBASIC-2.29□□□□□ -2.78
PTP4A1Q93096 SNORD45.1-201ENST00000363181 77 ntBASIC-2.3□□□□□ -2.78
PTP4A1Q93096 RNU6-604P-201ENST00000390917 100 ntBASIC-2.3□□□□□ -2.78
PTP4A1Q93096 RNU6-129P-201ENST00000391022 107 ntBASIC-2.3□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 209.4 ms