Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MIR519C-201ENST00000385053 87 ntBASIC-2.43□□□□□ -2.8
HTTP42858 Y_RNA.599-201ENST00000410489 109 ntBASIC-2.43□□□□□ -2.8
HTTP42858 AC139453.2-201ENST00000487255 133 ntBASIC-2.43□□□□□ -2.8
HTTP42858 RNU6-557P-201ENST00000516842 110 ntBASIC-2.43□□□□□ -2.8
HTTP42858 AC020661.2-201ENST00000560114 134 ntBASIC-2.43□□□□□ -2.8
HTTP42858 RNU6-330P-201ENST00000363015 107 ntBASIC-2.44□□□□□ -2.8
HTTP42858 MIR124-1-201ENST00000385275 85 ntBASIC-2.44□□□□□ -2.8
HTTP42858 SNORD37.2-201ENST00000391075 66 ntBASIC-2.44□□□□□ -2.8
HTTP42858 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.44□□□□□ -2.8
HTTP42858 AL603755.1-201ENST00000619504 163 ntBASIC-2.44□□□□□ -2.8
HTTP42858 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.44□□□□□ -2.8
HTTP42858 MIR1297-201ENST00000637311 77 ntBASIC-2.44□□□□□ -2.8
HTTP42858 SNORA8.1-201ENST00000384250 140 ntBASIC-2.44□□□□□ -2.8
HTTP42858 MTND2P23-201ENST00000422990 651 ntBASIC-2.44□□□□□ -2.8
HTTP42858 SNORD58B-201ENST00000607313 66 ntBASIC-2.44□□□□□ -2.8
HTTP42858 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.44□□□□□ -2.8
HTTP42858 RNU6-451P-201ENST00000362921 107 ntBASIC-2.45□□□□□ -2.8
HTTP42858 RNU6-940P-201ENST00000363433 104 ntBASIC-2.45□□□□□ -2.8
HTTP42858 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.45□□□□□ -2.8
HTTP42858 AC093729.1-201ENST00000513074 128 ntBASIC-2.45□□□□□ -2.8
HTTP42858 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.46□□□□□ -2.8
HTTP42858 SNORA40.14-201ENST00000516543 86 ntBASIC-2.46□□□□□ -2.8
HTTP42858 RNU6-776P-201ENST00000364403 104 ntBASIC-2.46□□□□□ -2.8
HTTP42858 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.46□□□□□ -2.8
HTTP42858 MIR656-201ENST00000385224 78 ntBASIC-2.46□□□□□ -2.8
HTTP42858 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.46□□□□□ -2.8
HTTP42858 SNORA63.7-201ENST00000365579 123 ntBASIC-2.46□□□□□ -2.8
HTTP42858 RNU6-196P-201ENST00000384315 107 ntBASIC-2.46□□□□□ -2.8
HTTP42858 MIR548AI-201ENST00000579940 88 ntBASIC-2.46□□□□□ -2.8
HTTP42858 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.47□□□□□ -2.8
HTTP42858 RNU6-806P-201ENST00000365147 105 ntBASIC-2.47□□□□□ -2.81
HTTP42858 RNU7-121P-201ENST00000516604 62 ntBASIC-2.47□□□□□ -2.81
HTTP42858 SNORA40.16-201ENST00000517238 121 ntBASIC-2.48□□□□□ -2.81
HTTP42858 AL160413.1-201ENST00000622780 310 ntBASIC-2.48□□□□□ -2.81
HTTP42858 RNU7-61P-201ENST00000515897 61 ntBASIC-2.48□□□□□ -2.81
HTTP42858 RNU6-916P-201ENST00000516088 109 ntBASIC-2.48□□□□□ -2.81
HTTP42858 MIR4801-201ENST00000582704 82 ntBASIC-2.48□□□□□ -2.81
HTTP42858 MIR548AH-201ENST00000637109 76 ntBASIC-2.48□□□□□ -2.81
HTTP42858 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.48□□□□□ -2.81
HTTP42858 RNU6-450P-201ENST00000364654 107 ntBASIC-2.48□□□□□ -2.81
HTTP42858 RNU4-85P-201ENST00000364675 123 ntBASIC-2.48□□□□□ -2.81
HTTP42858 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.48□□□□□ -2.81
HTTP42858 MIR4679-2-201ENST00000578358 77 ntBASIC-2.48□□□□□ -2.81
HTTP42858 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.49□□□□□ -2.81
HTTP42858 RNU6-887P-201ENST00000410660 100 ntBASIC-2.49□□□□□ -2.81
HTTP42858 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.49□□□□□ -2.81
HTTP42858 MIR559-201ENST00000385188 96 ntBASIC-2.49□□□□□ -2.81
HTTP42858 RNU6-231P-201ENST00000517122 103 ntBASIC-2.49□□□□□ -2.81
HTTP42858 Y_RNA.88-201ENST00000363029 99 ntBASIC-2.5□□□□□ -2.81
HTTP42858 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.5□□□□□ -2.81
HTTP42858 RN7SKP298-201ENST00000515950 94 ntBASIC-2.5□□□□□ -2.81
HTTP42858 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.5□□□□□ -2.81
HTTP42858 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.5□□□□□ -2.81
HTTP42858 SNORA25.5-201ENST00000363782 126 ntBASIC-2.51□□□□□ -2.81
HTTP42858 MIR154-201ENST00000385243 84 ntBASIC-2.51□□□□□ -2.81
HTTP42858 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.51□□□□□ -2.81
HTTP42858 SNORD115.2-201ENST00000391126 59 ntBASIC-2.51□□□□□ -2.81
HTTP42858 RNU6-70P-201ENST00000516438 60 ntBASIC-2.51□□□□□ -2.81
HTTP42858 SNORD116.3-201ENST00000517176 78 ntBASIC-2.51□□□□□ -2.81
HTTP42858 RNU2-72P-201ENST00000411175 163 ntBASIC-2.51□□□□□ -2.81
HTTP42858 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.51□□□□□ -2.81
HTTP42858 RNU6-795P-201ENST00000516323 103 ntBASIC-2.51□□□□□ -2.81
HTTP42858 RNU6-232P-201ENST00000517144 64 ntBASIC-2.51□□□□□ -2.81
HTTP42858 MIR664A-201ENST00000626086 82 ntBASIC-2.51□□□□□ -2.81
HTTP42858 SNORD45A-201ENST00000384512 84 ntBASIC-2.52□□□□□ -2.81
HTTP42858 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.52□□□□□ -2.81
HTTP42858 RNU6-780P-201ENST00000391030 104 ntBASIC-2.52□□□□□ -2.81
HTTP42858 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.52□□□□□ -2.81
HTTP42858 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.52□□□□□ -2.81
HTTP42858 AC078883.4-201ENST00000623218 367 ntBASIC-2.52□□□□□ -2.81
HTTP42858 RNU6-770P-201ENST00000363929 105 ntBASIC-2.52□□□□□ -2.81
HTTP42858 RNU6-686P-201ENST00000364839 107 ntBASIC-2.52□□□□□ -2.81
HTTP42858 SNORD45C-201ENST00000383893 79 ntBASIC-2.52□□□□□ -2.81
HTTP42858 AC074348.1-201ENST00000426503 132 ntBASIC-2.52□□□□□ -2.81
HTTP42858 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-2.52□□□□□ -2.81
HTTP42858 RNU6-402P-201ENST00000410678 103 ntBASIC-2.53□□□□□ -2.81
HTTP42858 RNU7-125P-201ENST00000458760 62 ntBASIC-2.53□□□□□ -2.81
HTTP42858 RNU5A-2P-201ENST00000384337 116 ntBASIC-2.53□□□□□ -2.81
HTTP42858 Y_RNA.496-201ENST00000384444 101 ntBASIC-2.53□□□□□ -2.81
HTTP42858 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.53□□□□□ -2.81
HTTP42858 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.53□□□□□ -2.81
HTTP42858 RNU6-751P-201ENST00000516382 101 ntBASIC-2.53□□□□□ -2.81
HTTP42858 RNU6-483P-201ENST00000384088 108 ntBASIC-2.53□□□□□ -2.82
HTTP42858 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.53□□□□□ -2.82
HTTP42858 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.54□□□□□ -2.82
HTTP42858 U6atac.1-201ENST00000616025 117 ntBASIC-2.54□□□□□ -2.82
HTTP42858 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.54□□□□□ -2.82
HTTP42858 RNU6-460P-201ENST00000391158 108 ntBASIC-2.54□□□□□ -2.82
HTTP42858 MIR548H4-201ENST00000408689 111 ntBASIC-2.54□□□□□ -2.82
HTTP42858 RNY3P16-201ENST00000516338 101 ntBASIC-2.54□□□□□ -2.82
HTTP42858 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.54□□□□□ -2.82
HTTP42858 AC113139.1-201ENST00000605049 239 ntBASIC-2.55□□□□□ -2.82
HTTP42858 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.55□□□□□ -2.82
HTTP42858 RNU7-30P-201ENST00000516835 62 ntBASIC-2.55□□□□□ -2.82
HTTP42858 SNORA63.4-201ENST00000362763 126 ntBASIC-2.56□□□□□ -2.82
HTTP42858 MTND5P22-201ENST00000458380 195 ntBASIC-2.56□□□□□ -2.82
HTTP42858 RNU6-890P-201ENST00000384121 107 ntBASIC-2.57□□□□□ -2.82
HTTP42858 RNU6-239P-201ENST00000390990 99 ntBASIC-2.57□□□□□ -2.82
HTTP42858 SNORA40.15-201ENST00000516884 107 ntBASIC-2.57□□□□□ -2.82
HTTP42858 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.57□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms