Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RNU6-168P-201ENST00000516189 101 ntBASIC-1.2□□□□□ -2.6
SHMT2P34897 RNU6-267P-201ENST00000516714 103 ntBASIC-1.2□□□□□ -2.6
SHMT2P34897 RNU6-158P-201ENST00000517104 100 ntBASIC-1.2□□□□□ -2.6
SHMT2P34897 AL365222.1-201ENST00000614661 98 ntBASIC-1.2□□□□□ -2.6
SHMT2P34897 RNU6-598P-201ENST00000364017 105 ntBASIC-1.21□□□□□ -2.6
SHMT2P34897 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.21□□□□□ -2.6
SHMT2P34897 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.21□□□□□ -2.6
SHMT2P34897 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.21□□□□□ -2.6
SHMT2P34897 MIR3165-201ENST00000579874 75 ntBASIC-1.21□□□□□ -2.6
SHMT2P34897 MIR4490-201ENST00000582647 84 ntBASIC-1.21□□□□□ -2.6
SHMT2P34897 RNU6-604P-201ENST00000390917 100 ntBASIC-1.22□□□□□ -2.6
SHMT2P34897 AC093729.1-201ENST00000513074 128 ntBASIC-1.22□□□□□ -2.6
SHMT2P34897 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.22□□□□□ -2.6
SHMT2P34897 RNU6-557P-201ENST00000516842 110 ntBASIC-1.22□□□□□ -2.6
SHMT2P34897 MIR4520-1-201ENST00000582609 70 ntBASIC-1.22□□□□□ -2.6
SHMT2P34897 MIR3675-201ENST00000583661 73 ntBASIC-1.22□□□□□ -2.6
SHMT2P34897 MIR548C-201ENST00000384815 97 ntBASIC-1.23□□□□□ -2.61
SHMT2P34897 RNU6-696P-201ENST00000390834 107 ntBASIC-1.23□□□□□ -2.61
SHMT2P34897 RNA5SP461-201ENST00000516451 104 ntBASIC-1.23□□□□□ -2.61
SHMT2P34897 MIR5591-201ENST00000578248 65 ntBASIC-1.23□□□□□ -2.61
SHMT2P34897 RNU6-630P-201ENST00000391258 106 ntBASIC-1.24□□□□□ -2.61
SHMT2P34897 MIR548Q-201ENST00000408404 100 ntBASIC-1.24□□□□□ -2.61
SHMT2P34897 RNU6-303P-201ENST00000517091 106 ntBASIC-1.24□□□□□ -2.61
SHMT2P34897 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.25□□□□□ -2.61
SHMT2P34897 RNU6-79P-201ENST00000362511 107 ntBASIC-1.25□□□□□ -2.61
SHMT2P34897 SNORA8.1-201ENST00000384250 140 ntBASIC-1.25□□□□□ -2.61
SHMT2P34897 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.25□□□□□ -2.61
SHMT2P34897 HLA-S-202ENST00000425174 53 ntBASIC-1.25□□□□□ -2.61
SHMT2P34897 MIR548BB-201ENST00000626714 66 ntBASIC-1.25□□□□□ -2.61
SHMT2P34897 RNU6-81P-201ENST00000365608 104 ntBASIC-1.26□□□□□ -2.61
SHMT2P34897 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.26□□□□□ -2.61
SHMT2P34897 RNU6-402P-201ENST00000410678 103 ntBASIC-1.26□□□□□ -2.61
SHMT2P34897 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.26□□□□□ -2.61
SHMT2P34897 U2.18-201ENST00000622185 84 ntBASIC-1.26□□□□□ -2.61
SHMT2P34897 SNORD45.1-201ENST00000363181 77 ntBASIC-1.27□□□□□ -2.61
SHMT2P34897 RNU6-698P-201ENST00000363523 107 ntBASIC-1.27□□□□□ -2.61
SHMT2P34897 SNORD115-37-201ENST00000363768 82 ntBASIC-1.27□□□□□ -2.61
SHMT2P34897 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.27□□□□□ -2.61
SHMT2P34897 RNU6-686P-201ENST00000364839 107 ntBASIC-1.27□□□□□ -2.61
SHMT2P34897 RNU6-34P-201ENST00000364874 107 ntBASIC-1.27□□□□□ -2.61
SHMT2P34897 MIR4770-201ENST00000579149 58 ntBASIC-1.27□□□□□ -2.61
SHMT2P34897 MIR548V-201ENST00000584165 80 ntBASIC-1.27□□□□□ -2.61
SHMT2P34897 MIR4320-201ENST00000636981 65 ntBASIC-1.27□□□□□ -2.61
SHMT2P34897 MIR450A1-201ENST00000362262 91 ntBASIC-1.28□□□□□ -2.61
SHMT2P34897 RNA5SP86-201ENST00000390869 98 ntBASIC-1.28□□□□□ -2.61
SHMT2P34897 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.28□□□□□ -2.61
SHMT2P34897 MIR3671-201ENST00000580455 88 ntBASIC-1.28□□□□□ -2.61
SHMT2P34897 MIR3668-201ENST00000582138 75 ntBASIC-1.28□□□□□ -2.61
SHMT2P34897 AP001318.4-201ENST00000616637 121 ntBASIC-1.28□□□□□ -2.61
SHMT2P34897 MALAT1.1-201ENST00000618249 95 ntBASIC-1.28□□□□□ -2.61
SHMT2P34897 RNU6-226P-201ENST00000363778 107 ntBASIC-1.29□□□□□ -2.62
SHMT2P34897 MIR488-201ENST00000365739 83 ntBASIC-1.29□□□□□ -2.62
SHMT2P34897 SNORD116-22-201ENST00000384430 92 ntBASIC-1.3□□□□□ -2.62
SHMT2P34897 RNU6-258P-201ENST00000390884 101 ntBASIC-1.3□□□□□ -2.62
SHMT2P34897 MIR4484-201ENST00000582855 83 ntBASIC-1.3□□□□□ -2.62
SHMT2P34897 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.3□□□□□ -2.62
SHMT2P34897 RNU6-834P-201ENST00000362367 110 ntBASIC-1.31□□□□□ -2.62
SHMT2P34897 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.31□□□□□ -2.62
SHMT2P34897 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.31□□□□□ -2.62
SHMT2P34897 MIR630-201ENST00000384957 97 ntBASIC-1.31□□□□□ -2.62
SHMT2P34897 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.31□□□□□ -2.62
SHMT2P34897 SNORD113-2-201ENST00000391082 72 ntBASIC-1.31□□□□□ -2.62
SHMT2P34897 AC018880.2-201ENST00000414265 201 ntBASIC-1.31□□□□□ -2.62
SHMT2P34897 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.32□□□□□ -2.62
SHMT2P34897 RNU6-675P-201ENST00000384236 104 ntBASIC-1.32□□□□□ -2.62
SHMT2P34897 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.32□□□□□ -2.62
SHMT2P34897 SNORA41B-201ENST00000384785 128 ntBASIC-1.32□□□□□ -2.62
SHMT2P34897 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.32□□□□□ -2.62
SHMT2P34897 MIR664A-201ENST00000626086 82 ntBASIC-1.32□□□□□ -2.62
SHMT2P34897 MIR2052-201ENST00000636055 55 ntBASIC-1.32□□□□□ -2.62
SHMT2P34897 RNU6-129P-201ENST00000391022 107 ntBASIC-1.33□□□□□ -2.62
SHMT2P34897 RNY4P18-201ENST00000391107 89 ntBASIC-1.33□□□□□ -2.62
SHMT2P34897 RNU6-400P-201ENST00000391173 106 ntBASIC-1.33□□□□□ -2.62
SHMT2P34897 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.33□□□□□ -2.62
SHMT2P34897 AL031737.1-201ENST00000450125 223 ntBASIC-1.33□□□□□ -2.62
SHMT2P34897 MIR3170-201ENST00000582699 77 ntBASIC-1.33□□□□□ -2.62
SHMT2P34897 SNORD113.1-201ENST00000363280 73 ntBASIC-1.34□□□□□ -2.62
SHMT2P34897 RNU6-640P-201ENST00000363693 105 ntBASIC-1.34□□□□□ -2.62
SHMT2P34897 RNU6-563P-201ENST00000364872 108 ntBASIC-1.34□□□□□ -2.62
SHMT2P34897 SNORD116-16-201ENST00000384533 92 ntBASIC-1.34□□□□□ -2.62
SHMT2P34897 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.34□□□□□ -2.62
SHMT2P34897 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.34□□□□□ -2.62
SHMT2P34897 AC006160.2-201ENST00000637708 154 ntBASIC-1.34□□□□□ -2.62
SHMT2P34897 RNU6-22P-201ENST00000384355 107 ntBASIC-1.35□□□□□ -2.63
SHMT2P34897 MIR487B-201ENST00000385021 84 ntBASIC-1.35□□□□□ -2.63
SHMT2P34897 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.35□□□□□ -2.63
SHMT2P34897 SNORD1B-201ENST00000363091 84 ntBASIC-1.36□□□□□ -2.63
SHMT2P34897 SNORD45A-201ENST00000384512 84 ntBASIC-1.36□□□□□ -2.63
SHMT2P34897 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.36□□□□□ -2.63
SHMT2P34897 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.36□□□□□ -2.63
SHMT2P34897 MIR409-201ENST00000362237 79 ntBASIC-1.37□□□□□ -2.63
SHMT2P34897 MIR548H1-201ENST00000408610 102 ntBASIC-1.37□□□□□ -2.63
SHMT2P34897 RNA5SP266-201ENST00000410273 108 ntBASIC-1.37□□□□□ -2.63
SHMT2P34897 SNORA40.13-201ENST00000516379 120 ntBASIC-1.37□□□□□ -2.63
SHMT2P34897 AC120024.2-201ENST00000576526 175 ntBASIC-1.37□□□□□ -2.63
SHMT2P34897 RNA5SP215-201ENST00000363440 122 ntBASIC-1.38□□□□□ -2.63
SHMT2P34897 MT-TR-201ENST00000387439 65 ntBASIC-1.38□□□□□ -2.63
SHMT2P34897 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.38□□□□□ -2.63
SHMT2P34897 MIR429-201ENST00000362106 83 ntBASIC-1.39□□□□□ -2.63
SHMT2P34897 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms