Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.5■■□□□ 1.03
R3HCC1Q9Y3T6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 ABHD17AP1-201ENST00000358206 933 ntBASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 RPS2P52-201ENST00000469610 820 ntBASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 AC008403.3-201ENST00000598924 454 ntBASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.49■■□□□ 1.03
R3HCC1Q9Y3T6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 AC124067.4-201ENST00000519691 2379 ntBASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 PRKY-204ENST00000533551 1019 ntBASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 ITM2C-210ENST00000620962 501 ntBASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
R3HCC1Q9Y3T6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 AC128676.1-201ENST00000454392 318 ntBASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 TMEM191A-211ENST00000637163 1067 ntBASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
R3HCC1Q9Y3T6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.46■■□□□ 1.03
R3HCC1Q9Y3T6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
R3HCC1Q9Y3T6 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms