Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LHX6Q9UPM6 AC092720.2-201ENST00000602388 1665 ntBASIC17.79■□□□□ 0.44
LHX6Q9UPM6 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.79■□□□□ 0.44
LHX6Q9UPM6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LHX6Q9UPM6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX6Q9UPM6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX6Q9UPM6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LHX6Q9UPM6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 AC093909.1-201ENST00000504731 1122 ntBASIC17.78■□□□□ 0.44
LHX6Q9UPM6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 AC239800.4-201ENST00000603712 296 ntBASIC17.78■□□□□ 0.44
LHX6Q9UPM6 AC137695.1-201ENST00000604126 489 ntBASIC17.78■□□□□ 0.44
LHX6Q9UPM6 AP000240.1-201ENST00000609910 452 ntBASIC17.78■□□□□ 0.44
LHX6Q9UPM6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
LHX6Q9UPM6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 TSPY22P-201ENST00000427496 604 ntBASIC17.77■□□□□ 0.44
LHX6Q9UPM6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 SAPCD2P3-201ENST00000455031 850 ntBASIC17.77■□□□□ 0.44
LHX6Q9UPM6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
LHX6Q9UPM6 AL162741.1-201ENST00000565563 1558 ntBASIC17.77■□□□□ 0.44
LHX6Q9UPM6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LHX6Q9UPM6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LHX6Q9UPM6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LHX6Q9UPM6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.77■□□□□ 0.43
LHX6Q9UPM6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.77■□□□□ 0.43
LHX6Q9UPM6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 AKR1C7P-201ENST00000305623 895 ntBASIC17.76■□□□□ 0.43
LHX6Q9UPM6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 AC091917.2-201ENST00000505002 744 ntBASIC17.76■□□□□ 0.43
LHX6Q9UPM6 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.76■□□□□ 0.43
LHX6Q9UPM6 AC083906.6-201ENST00000641366 219 ntBASIC17.76■□□□□ 0.43
LHX6Q9UPM6 AC079781.4-201ENST00000641908 219 ntBASIC17.76■□□□□ 0.43
LHX6Q9UPM6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LHX6Q9UPM6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 AL031284.1-201ENST00000419297 478 ntBASIC17.75■□□□□ 0.43
LHX6Q9UPM6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 MIR3908-201ENST00000579798 126 ntBASIC17.75■□□□□ 0.43
LHX6Q9UPM6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.75■□□□□ 0.43
LHX6Q9UPM6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms