Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 AC005332.7-201ENST00000614046 2005 ntBASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SYNPO2Q9UMS6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 AL162741.1-201ENST00000565563 1558 ntBASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 AC011498.5-201ENST00000592027 486 ntBASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.66■■□□□ 1.06
SYNPO2Q9UMS6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SYNPO2Q9UMS6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.65■■□□□ 1.06
SYNPO2Q9UMS6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SYNPO2Q9UMS6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.65■■□□□ 1.06
SYNPO2Q9UMS6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.65■■□□□ 1.06
SYNPO2Q9UMS6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.65■■□□□ 1.06
SYNPO2Q9UMS6 AL357033.4-201ENST00000617703 1807 ntBASIC21.65■■□□□ 1.06
SYNPO2Q9UMS6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.65■■□□□ 1.06
SYNPO2Q9UMS6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
SYNPO2Q9UMS6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.65■■□□□ 1.06
SYNPO2Q9UMS6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.65■■□□□ 1.06
SYNPO2Q9UMS6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.65■■□□□ 1.06
SYNPO2Q9UMS6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SYNPO2Q9UMS6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.64■■□□□ 1.06
SYNPO2Q9UMS6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SYNPO2Q9UMS6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 AL161938.1-201ENST00000569833 2180 ntBASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SYNPO2Q9UMS6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 AC007952.6-201ENST00000573168 2673 ntBASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 AC003957.1-201ENST00000625108 2673 ntBASIC21.63■■□□□ 1.05
SYNPO2Q9UMS6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 NPAP1P7-201ENST00000613027 823 ntBASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 KRT8P50-201ENST00000562022 1438 ntBASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SYNPO2Q9UMS6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.61■■□□□ 1.05
SYNPO2Q9UMS6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms