Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PPARGC1AQ9UBK2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 AC073912.3-201ENST00000624414 853 ntBASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
PPARGC1AQ9UBK2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PPARGC1AQ9UBK2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPARGC1AQ9UBK2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPARGC1AQ9UBK2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PPARGC1AQ9UBK2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.58■□□□□ 0.73
PPARGC1AQ9UBK2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.58■□□□□ 0.73
PPARGC1AQ9UBK2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.58■□□□□ 0.73
PPARGC1AQ9UBK2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.58■□□□□ 0.73
PPARGC1AQ9UBK2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.58■□□□□ 0.73
PPARGC1AQ9UBK2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPARGC1AQ9UBK2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PPARGC1AQ9UBK2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 SLC25A1P2-201ENST00000430693 912 ntBASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 KRT8P9-201ENST00000558927 1449 ntBASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.58■□□□□ 0.72
PPARGC1AQ9UBK2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 AC087499.1-201ENST00000418141 1075 ntBASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 C2orf69P3-201ENST00000565542 1120 ntBASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PPARGC1AQ9UBK2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms