Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 AL049840.3-201ENST00000602669 611 ntBASIC19.95■□□□□ 0.78
CHD7Q9P2D1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHD7Q9P2D1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.94■□□□□ 0.78
CHD7Q9P2D1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 ZNF815P-204ENST00000434898 1737 ntBASIC19.93■□□□□ 0.78
CHD7Q9P2D1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 HNRNPDP1-201ENST00000439535 754 ntBASIC19.93■□□□□ 0.78
CHD7Q9P2D1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHD7Q9P2D1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 RN7SL606P-201ENST00000472779 293 ntBASIC19.92■□□□□ 0.78
CHD7Q9P2D1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 IGHGP-201ENST00000390555 1178 ntBASIC19.92■□□□□ 0.78
CHD7Q9P2D1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 AC140113.2-201ENST00000604370 208 ntBASIC19.92■□□□□ 0.78
CHD7Q9P2D1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD7Q9P2D1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 AC010327.4-202ENST00000591484 748 ntBASIC19.91■□□□□ 0.78
CHD7Q9P2D1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHD7Q9P2D1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms