Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 AL390719.1-204ENST00000412397 1219 ntBASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 AC133552.2-202ENST00000575694 574 ntBASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 AC084018.2-201ENST00000613093 2607 ntBASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 AC141586.3-201ENST00000562166 1838 ntBASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
C12orf4Q9NQ89 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 TFP1-202ENST00000475455 1573 ntBASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 AL161938.1-201ENST00000569833 2180 ntBASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
C12orf4Q9NQ89 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
C12orf4Q9NQ89 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 TEX21P-204ENST00000641479 1693 ntBASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C12orf4Q9NQ89 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms