Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RNF41Q9H4P4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
RNF41Q9H4P4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
RNF41Q9H4P4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.2■■□□□ 1.14
RNF41Q9H4P4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 AC008556.1-201ENST00000610908 2040 ntBASIC22.19■■□□□ 1.14
RNF41Q9H4P4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 AC092865.7-201ENST00000641832 219 ntBASIC22.19■■□□□ 1.14
RNF41Q9H4P4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 AC036111.1-201ENST00000533973 1582 ntBASIC22.19■■□□□ 1.14
RNF41Q9H4P4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 AC006333.2-201ENST00000607957 2099 ntBASIC22.19■■□□□ 1.14
RNF41Q9H4P4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RNF41Q9H4P4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 RCN1P1-201ENST00000400413 996 ntBASIC22.18■■□□□ 1.14
RNF41Q9H4P4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 AC141257.4-201ENST00000634557 245 ntBASIC22.18■■□□□ 1.14
RNF41Q9H4P4 AC136944.6-201ENST00000634818 245 ntBASIC22.18■■□□□ 1.14
RNF41Q9H4P4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RNF41Q9H4P4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 BX323043.1-201ENST00000641006 1765 ntBASIC22.17■■□□□ 1.14
RNF41Q9H4P4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RNF41Q9H4P4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF41Q9H4P4 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF41Q9H4P4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
RNF41Q9H4P4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF41Q9H4P4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF41Q9H4P4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF41Q9H4P4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.16■■□□□ 1.14
RNF41Q9H4P4 MIR564-202ENST00000385049 94 ntBASIC22.16■■□□□ 1.14
RNF41Q9H4P4 AP000523.1-201ENST00000398242 1049 ntBASIC22.16■■□□□ 1.14
RNF41Q9H4P4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC22.16■■□□□ 1.14
RNF41Q9H4P4 BX664615.1-201ENST00000443558 458 ntBASIC22.16■■□□□ 1.14
RNF41Q9H4P4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.16■■□□□ 1.14
RNF41Q9H4P4 NEK4P2-201ENST00000580004 1012 ntBASIC22.16■■□□□ 1.14
RNF41Q9H4P4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RNF41Q9H4P4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
RNF41Q9H4P4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RNF41Q9H4P4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 KRT18P57-201ENST00000443599 1254 ntBASIC22.15■■□□□ 1.14
RNF41Q9H4P4 AC009947.2-201ENST00000444014 672 ntBASIC22.15■■□□□ 1.14
RNF41Q9H4P4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RNF41Q9H4P4 MTMR9LP-203ENST00000426597 1545 ntBASIC22.15■■□□□ 1.14
RNF41Q9H4P4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms