Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NXF3Q9H4D5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
NXF3Q9H4D5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NXF3Q9H4D5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
NXF3Q9H4D5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NXF3Q9H4D5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NXF3Q9H4D5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NXF3Q9H4D5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NXF3Q9H4D5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.32■□□□□ 0.84
NXF3Q9H4D5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 AL136038.3-201ENST00000561909 1096 ntBASIC20.32■□□□□ 0.84
NXF3Q9H4D5 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NXF3Q9H4D5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 AL049812.1-201ENST00000432563 2267 ntBASIC20.31■□□□□ 0.84
NXF3Q9H4D5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 HBZP1-201ENST00000354915 429 ntBASIC20.31■□□□□ 0.84
NXF3Q9H4D5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 AC116407.4-201ENST00000623319 1061 ntBASIC20.31■□□□□ 0.84
NXF3Q9H4D5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NXF3Q9H4D5 AL161938.1-201ENST00000569833 2180 ntBASIC20.31■□□□□ 0.84
NXF3Q9H4D5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 MIR564-202ENST00000385049 94 ntBASIC20.3■□□□□ 0.84
NXF3Q9H4D5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 KRT18P23-201ENST00000435622 1283 ntBASIC20.3■□□□□ 0.84
NXF3Q9H4D5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 AL157888.1-201ENST00000631930 593 ntBASIC20.3■□□□□ 0.84
NXF3Q9H4D5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 AC005332.7-201ENST00000614046 2005 ntBASIC20.3■□□□□ 0.84
NXF3Q9H4D5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 AC116562.4-201ENST00000641316 2276 ntBASIC20.3■□□□□ 0.84
NXF3Q9H4D5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NXF3Q9H4D5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms