Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 MFAP1P1-201ENST00000442257 1255 ntBASIC17.44■□□□□ 0.38
UBQLN3Q9H347 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.44■□□□□ 0.38
UBQLN3Q9H347 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 C2orf69P3-201ENST00000565542 1120 ntBASIC17.43■□□□□ 0.38
UBQLN3Q9H347 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
UBQLN3Q9H347 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 LINC01568-207ENST00000641790 1380 ntBASIC17.42■□□□□ 0.38
UBQLN3Q9H347 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 TSPY14P-201ENST00000303979 915 ntBASIC17.42■□□□□ 0.38
UBQLN3Q9H347 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 EGLN1P1-201ENST00000531623 762 ntBASIC17.42■□□□□ 0.38
UBQLN3Q9H347 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBQLN3Q9H347 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN3Q9H347 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBQLN3Q9H347 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms