Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 MTDHP1-201ENST00000605323 784 ntBASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR2J3Q9H1A7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 AC069544.1-201ENST00000609399 999 ntBASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
POLR2J3Q9H1A7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 AC026366.1-201ENST00000488803 879 ntBASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 AC090192.1-201ENST00000517740 490 ntBASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 AC092666.2-201ENST00000613287 246 ntBASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
POLR2J3Q9H1A7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
POLR2J3Q9H1A7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
POLR2J3Q9H1A7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
POLR2J3Q9H1A7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
POLR2J3Q9H1A7 AL133373.2-201ENST00000623187 2828 ntBASIC17.39■□□□□ 0.38
POLR2J3Q9H1A7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 KRT16P5-201ENST00000455284 522 ntBASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
POLR2J3Q9H1A7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms