Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH11XQ9BZA7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC24.39■■□□□ 1.5
PCDH11XQ9BZA7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDH11XQ9BZA7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDH11XQ9BZA7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDH11XQ9BZA7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDH11XQ9BZA7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PCDH11XQ9BZA7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
PCDH11XQ9BZA7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDH11XQ9BZA7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
PCDH11XQ9BZA7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
PCDH11XQ9BZA7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDH11XQ9BZA7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 AC099336.1-202ENST00000602961 463 ntBASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 AL353801.3-201ENST00000609898 542 ntBASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC24.37■■□□□ 1.49
PCDH11XQ9BZA7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 IGHV3-47-201ENST00000425060 335 ntBASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 KRT16P4-201ENST00000453883 522 ntBASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 AL121912.1-201ENST00000603683 238 ntBASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 IRX1P1-201ENST00000438849 1838 ntBASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 UBQLN4P1-201ENST00000461599 1801 ntBASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH11XQ9BZA7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 CYP51A1P1-201ENST00000492267 1507 ntBASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
PCDH11XQ9BZA7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms